Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Zfp560Q3URI6 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zfp560Q3URI6 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Zfp560Q3URI6 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Zfp560Q3URI6 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Zfp560Q3URI6 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Zfp560Q3URI6 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zfp560Q3URI6 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zfp560Q3URI6 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Zfp560Q3URI6 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Gm11618-201ENSMUST00000117946 267 ntBASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Gm11803-201ENSMUST00000119966 444 ntBASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Gm10156-201ENSMUST00000122364 462 ntBASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Zfp560Q3URI6 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Gm8810-201ENSMUST00000172895 754 ntBASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Gm24196-201ENSMUST00000179161 110 ntBASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Gm10012-201ENSMUST00000078252 192 ntBASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zfp560Q3URI6 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Gm27847-201ENSMUST00000183711 107 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms