Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Gm35960-201ENSMUST00000202712 767 ntBASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Gm40879-201ENSMUST00000220759 612 ntBASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Gm25998-201ENSMUST00000175397 53 ntBASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Gm18706-201ENSMUST00000210053 1066 ntBASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Spg11Q3UHA3 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Gm13809-201ENSMUST00000117921 597 ntBASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Gm22144-201ENSMUST00000157402 102 ntBASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Gm2875-201ENSMUST00000211333 360 ntBASIC11.94□□□□□ -0.5
Spg11Q3UHA3 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.94□□□□□ -0.5
Spg11Q3UHA3 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms