Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Trim43aQ3TL54 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43aQ3TL54 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trim43aQ3TL54 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43aQ3TL54 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43aQ3TL54 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trim43aQ3TL54 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trim43aQ3TL54 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43aQ3TL54 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43aQ3TL54 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43aQ3TL54 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43aQ3TL54 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43aQ3TL54 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim43aQ3TL54 Gm7775-201ENSMUST00000218871 853 ntBASIC13.91□□□□□ -0.18
Trim43aQ3TL54 Gm24447-201ENSMUST00000083977 338 ntBASIC13.91□□□□□ -0.18
Trim43aQ3TL54 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43aQ3TL54 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43aQ3TL54 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43aQ3TL54 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim43aQ3TL54 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43aQ3TL54 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43aQ3TL54 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Trim43aQ3TL54 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43aQ3TL54 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Pck2-205ENSMUST00000226352 2784 ntBASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43aQ3TL54 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trim43aQ3TL54 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Gm12151-201ENSMUST00000121374 290 ntBASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.89□□□□□ -0.19
Trim43aQ3TL54 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Gm5161-201ENSMUST00000075243 853 ntBASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms