Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Gm27844-201ENSMUST00000183613 62 ntBASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 D9Wsu149-201ENSMUST00000214169 594 ntBASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim7Q3TJD7 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Gm13611-201ENSMUST00000118269 318 ntBASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Gm27438-201ENSMUST00000183480 110 ntBASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Gm44651-201ENSMUST00000207343 372 ntBASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Gm45770-201ENSMUST00000212105 616 ntBASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim7Q3TJD7 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pdlim7Q3TJD7 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pdlim7Q3TJD7 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
Pdlim7Q3TJD7 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.58□□□□□ -0.07
Pdlim7Q3TJD7 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pdlim7Q3TJD7 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.58□□□□□ -0.08
Pdlim7Q3TJD7 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim7Q3TJD7 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim7Q3TJD7 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim7Q3TJD7 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.58□□□□□ -0.08
Pdlim7Q3TJD7 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim7Q3TJD7 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim7Q3TJD7 Gm12058-201ENSMUST00000118614 437 ntBASIC14.58□□□□□ -0.08
Pdlim7Q3TJD7 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim7Q3TJD7 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.58□□□□□ -0.08
Pdlim7Q3TJD7 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim7Q3TJD7 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.58□□□□□ -0.08
Pdlim7Q3TJD7 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pdlim7Q3TJD7 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.58□□□□□ -0.08
Pdlim7Q3TJD7 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.58□□□□□ -0.08
Pdlim7Q3TJD7 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Pdlim7Q3TJD7 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim7Q3TJD7 Gm9211-201ENSMUST00000182882 975 ntBASIC14.58□□□□□ -0.08
Pdlim7Q3TJD7 Gm7003-201ENSMUST00000195089 312 ntBASIC14.58□□□□□ -0.08
Pdlim7Q3TJD7 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.58□□□□□ -0.08
Pdlim7Q3TJD7 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.58□□□□□ -0.08
Pdlim7Q3TJD7 Gm5051-201ENSMUST00000204085 485 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms