Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Gm42612-201ENSMUST00000197986 623 ntBASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Gm43170-201ENSMUST00000199827 612 ntBASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.75□□□□□ -0.21
Cul4aQ3TCH7 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cul4aQ3TCH7 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms