Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 AC154532.1-201ENSMUST00000227860 965 ntBASIC14.17□□□□□ -0.14
Col9a2Q07643 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col9a2Q07643 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.17□□□□□ -0.14
Col9a2Q07643 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Col9a2Q07643 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Col9a2Q07643 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.17□□□□□ -0.14
Col9a2Q07643 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.17□□□□□ -0.14
Col9a2Q07643 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.16□□□□□ -0.14
Col9a2Q07643 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Col9a2Q07643 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.16□□□□□ -0.14
Col9a2Q07643 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.16□□□□□ -0.14
Col9a2Q07643 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a2Q07643 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a2Q07643 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Col9a2Q07643 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Col9a2Q07643 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.16□□□□□ -0.14
Col9a2Q07643 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col9a2Q07643 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col9a2Q07643 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col9a2Q07643 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col9a2Q07643 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col9a2Q07643 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col9a2Q07643 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a2Q07643 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a2Q07643 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.16□□□□□ -0.14
Col9a2Q07643 Gm13875-201ENSMUST00000120162 282 ntBASIC14.16□□□□□ -0.14
Col9a2Q07643 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a2Q07643 Gm24548-201ENSMUST00000158650 108 ntBASIC14.16□□□□□ -0.14
Col9a2Q07643 Gm17376-201ENSMUST00000166016 84 ntBASIC14.16□□□□□ -0.14
Col9a2Q07643 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a2Q07643 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.16□□□□□ -0.14
Col9a2Q07643 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.16□□□□□ -0.14
Col9a2Q07643 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a2Q07643 Gm38266-201ENSMUST00000194931 421 ntBASIC14.16□□□□□ -0.14
Col9a2Q07643 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a2Q07643 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.16□□□□□ -0.14
Col9a2Q07643 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a2Q07643 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a2Q07643 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a2Q07643 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a2Q07643 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a2Q07643 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.16□□□□□ -0.14
Col9a2Q07643 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a2Q07643 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Col9a2Q07643 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a2Q07643 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a2Q07643 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a2Q07643 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Col9a2Q07643 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Col9a2Q07643 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col9a2Q07643 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col9a2Q07643 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col9a2Q07643 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col9a2Q07643 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col9a2Q07643 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Col9a2Q07643 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col9a2Q07643 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col9a2Q07643 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col9a2Q07643 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.15□□□□□ -0.14
Col9a2Q07643 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col9a2Q07643 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col9a2Q07643 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Col9a2Q07643 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.15□□□□□ -0.14
Col9a2Q07643 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col9a2Q07643 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col9a2Q07643 Gm24255-201ENSMUST00000104481 128 ntBASIC14.15□□□□□ -0.14
Col9a2Q07643 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.15□□□□□ -0.14
Col9a2Q07643 Gm12241-201ENSMUST00000118330 726 ntBASIC14.15□□□□□ -0.14
Col9a2Q07643 Gm4986-201ENSMUST00000119731 549 ntBASIC14.15□□□□□ -0.14
Col9a2Q07643 Gm12176-201ENSMUST00000121420 875 ntBASIC14.15□□□□□ -0.14
Col9a2Q07643 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col9a2Q07643 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col9a2Q07643 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.15□□□□□ -0.14
Col9a2Q07643 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col9a2Q07643 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col9a2Q07643 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Col9a2Q07643 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col9a2Q07643 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col9a2Q07643 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col9a2Q07643 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col9a2Q07643 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col9a2Q07643 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col9a2Q07643 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col9a2Q07643 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col9a2Q07643 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.14□□□□□ -0.15
Col9a2Q07643 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col9a2Q07643 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Col9a2Q07643 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms