Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a2Q02788 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a2Q02788 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a2Q02788 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a2Q02788 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a2Q02788 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a2Q02788 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a2Q02788 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Col6a2Q02788 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.07□□□□□ -0.32
Col6a2Q02788 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
Col6a2Q02788 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.07□□□□□ -0.32
Col6a2Q02788 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.07□□□□□ -0.32
Col6a2Q02788 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a2Q02788 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.07□□□□□ -0.32
Col6a2Q02788 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.07□□□□□ -0.32
Col6a2Q02788 Gm9823-201ENSMUST00000051212 327 ntBASIC13.07□□□□□ -0.32
Col6a2Q02788 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a2Q02788 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.07□□□□□ -0.32
Col6a2Q02788 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a2Q02788 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a2Q02788 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a2Q02788 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.07□□□□□ -0.32
Col6a2Q02788 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a2Q02788 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a2Q02788 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a2Q02788 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
Col6a2Q02788 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Col6a2Q02788 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a2Q02788 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.06□□□□□ -0.32
Col6a2Q02788 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Col6a2Q02788 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Col6a2Q02788 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Gm22018-201ENSMUST00000104357 131 ntBASIC13.06□□□□□ -0.32
Col6a2Q02788 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Col6a2Q02788 Gm11978-201ENSMUST00000122315 466 ntBASIC13.06□□□□□ -0.32
Col6a2Q02788 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.06□□□□□ -0.32
Col6a2Q02788 Gm25927-201ENSMUST00000175058 117 ntBASIC13.06□□□□□ -0.32
Col6a2Q02788 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.06□□□□□ -0.32
Col6a2Q02788 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.06□□□□□ -0.32
Col6a2Q02788 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.06□□□□□ -0.32
Col6a2Q02788 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Col6a2Q02788 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Col6a2Q02788 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Col6a2Q02788 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Col6a2Q02788 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Col6a2Q02788 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a2Q02788 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.05□□□□□ -0.32
Col6a2Q02788 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col6a2Q02788 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.05□□□□□ -0.32
Col6a2Q02788 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.05□□□□□ -0.32
Col6a2Q02788 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.05□□□□□ -0.32
Col6a2Q02788 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Col6a2Q02788 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.05□□□□□ -0.32
Col6a2Q02788 Gm18054-201ENSMUST00000207539 555 ntBASIC13.05□□□□□ -0.32
Col6a2Q02788 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.05□□□□□ -0.32
Col6a2Q02788 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.05□□□□□ -0.32
Col6a2Q02788 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 Gm19163-201ENSMUST00000223313 780 ntBASIC13.05□□□□□ -0.32
Col6a2Q02788 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms