Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GabpaQ00422 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GabpaQ00422 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GabpaQ00422 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
GabpaQ00422 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GabpaQ00422 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GabpaQ00422 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GabpaQ00422 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
GabpaQ00422 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GabpaQ00422 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
GabpaQ00422 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GabpaQ00422 Gm12502-201ENSMUST00000120197 444 ntBASIC14.82□□□□□ -0.04
GabpaQ00422 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GabpaQ00422 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.82□□□□□ -0.04
GabpaQ00422 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.82□□□□□ -0.04
GabpaQ00422 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.82□□□□□ -0.04
GabpaQ00422 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.82□□□□□ -0.04
GabpaQ00422 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
GabpaQ00422 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.82□□□□□ -0.04
GabpaQ00422 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
GabpaQ00422 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.82□□□□□ -0.04
GabpaQ00422 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GabpaQ00422 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
GabpaQ00422 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GabpaQ00422 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
GabpaQ00422 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GabpaQ00422 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.82□□□□□ -0.04
GabpaQ00422 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GabpaQ00422 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GabpaQ00422 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GabpaQ00422 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GabpaQ00422 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GabpaQ00422 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.82□□□□□ -0.04
GabpaQ00422 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GabpaQ00422 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.82□□□□□ -0.04
GabpaQ00422 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
GabpaQ00422 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
GabpaQ00422 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GabpaQ00422 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
GabpaQ00422 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
GabpaQ00422 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GabpaQ00422 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GabpaQ00422 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
GabpaQ00422 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
GabpaQ00422 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
GabpaQ00422 Gm11222-201ENSMUST00000119005 738 ntBASIC14.81□□□□□ -0.04
GabpaQ00422 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
GabpaQ00422 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
GabpaQ00422 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.81□□□□□ -0.04
GabpaQ00422 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GabpaQ00422 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.81□□□□□ -0.04
GabpaQ00422 Gm8099-201ENSMUST00000200510 742 ntBASIC14.81□□□□□ -0.04
GabpaQ00422 Gm18056-201ENSMUST00000207670 568 ntBASIC14.81□□□□□ -0.04
GabpaQ00422 Gm18061-201ENSMUST00000208350 562 ntBASIC14.81□□□□□ -0.04
GabpaQ00422 Gm18063-201ENSMUST00000208529 568 ntBASIC14.81□□□□□ -0.04
GabpaQ00422 Gm18052-201ENSMUST00000208750 559 ntBASIC14.81□□□□□ -0.04
GabpaQ00422 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.81□□□□□ -0.04
GabpaQ00422 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
GabpaQ00422 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
GabpaQ00422 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GabpaQ00422 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GabpaQ00422 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
GabpaQ00422 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GabpaQ00422 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GabpaQ00422 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.81□□□□□ -0.04
GabpaQ00422 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
GabpaQ00422 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GabpaQ00422 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
GabpaQ00422 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
GabpaQ00422 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
GabpaQ00422 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GabpaQ00422 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GabpaQ00422 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
GabpaQ00422 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GabpaQ00422 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GabpaQ00422 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
GabpaQ00422 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GabpaQ00422 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GabpaQ00422 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GabpaQ00422 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.8□□□□□ -0.04
GabpaQ00422 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
GabpaQ00422 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GabpaQ00422 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
GabpaQ00422 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.8□□□□□ -0.04
GabpaQ00422 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GabpaQ00422 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.8□□□□□ -0.04
GabpaQ00422 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.8□□□□□ -0.04
GabpaQ00422 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GabpaQ00422 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GabpaQ00422 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GabpaQ00422 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GabpaQ00422 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GabpaQ00422 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GabpaQ00422 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
GabpaQ00422 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GabpaQ00422 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GabpaQ00422 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GabpaQ00422 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GabpaQ00422 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GabpaQ00422 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms