Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Gm12138-201ENSMUST00000122180 951 ntBASIC13.35□□□□□ -0.27
Thumpd3P97770 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.35□□□□□ -0.27
Thumpd3P97770 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Thumpd3P97770 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Thumpd3P97770 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Thumpd3P97770 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd3P97770 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd3P97770 Gm4804-201ENSMUST00000182234 999 ntBASIC13.35□□□□□ -0.27
Thumpd3P97770 Mir6392-201ENSMUST00000184924 108 ntBASIC13.35□□□□□ -0.27
Thumpd3P97770 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.35□□□□□ -0.27
Thumpd3P97770 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.35□□□□□ -0.27
Thumpd3P97770 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.35□□□□□ -0.27
Thumpd3P97770 Gm45668-201ENSMUST00000211271 493 ntBASIC13.35□□□□□ -0.27
Thumpd3P97770 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.35□□□□□ -0.27
Thumpd3P97770 Gm18624-201ENSMUST00000220966 658 ntBASIC13.35□□□□□ -0.27
Thumpd3P97770 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd3P97770 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd3P97770 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd3P97770 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd3P97770 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Thumpd3P97770 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd3P97770 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd3P97770 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Thumpd3P97770 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd3P97770 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd3P97770 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd3P97770 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Thumpd3P97770 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd3P97770 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.34□□□□□ -0.27
Thumpd3P97770 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd3P97770 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd3P97770 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd3P97770 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd3P97770 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd3P97770 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd3P97770 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.34□□□□□ -0.27
Thumpd3P97770 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Thumpd3P97770 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd3P97770 Mir874-201ENSMUST00000104769 76 ntBASIC13.34□□□□□ -0.27
Thumpd3P97770 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd3P97770 Gm6912-201ENSMUST00000117218 544 ntBASIC13.34□□□□□ -0.27
Thumpd3P97770 Gm15678-201ENSMUST00000117573 960 ntBASIC13.34□□□□□ -0.27
Thumpd3P97770 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.34□□□□□ -0.27
Thumpd3P97770 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd3P97770 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd3P97770 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.34□□□□□ -0.27
Thumpd3P97770 Gm18187-201ENSMUST00000196476 984 ntBASIC13.34□□□□□ -0.27
Thumpd3P97770 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.34□□□□□ -0.27
Thumpd3P97770 Gm19220-201ENSMUST00000222682 803 ntBASIC13.34□□□□□ -0.27
Thumpd3P97770 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd3P97770 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd3P97770 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Thumpd3P97770 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd3P97770 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd3P97770 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd3P97770 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.34□□□□□ -0.27
Thumpd3P97770 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd3P97770 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd3P97770 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd3P97770 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.34□□□□□ -0.27
Thumpd3P97770 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd3P97770 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd3P97770 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd3P97770 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd3P97770 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd3P97770 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Thumpd3P97770 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Thumpd3P97770 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Thumpd3P97770 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
Thumpd3P97770 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Thumpd3P97770 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Thumpd3P97770 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Thumpd3P97770 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Thumpd3P97770 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd3P97770 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd3P97770 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd3P97770 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Thumpd3P97770 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd3P97770 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd3P97770 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd3P97770 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd3P97770 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Thumpd3P97770 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Thumpd3P97770 Gm24420-201ENSMUST00000176676 59 ntBASIC13.33□□□□□ -0.28
Thumpd3P97770 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Thumpd3P97770 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Thumpd3P97770 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.33□□□□□ -0.28
Thumpd3P97770 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.33□□□□□ -0.28
Thumpd3P97770 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.33□□□□□ -0.28
Thumpd3P97770 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.33□□□□□ -0.28
Thumpd3P97770 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd3P97770 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd3P97770 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Thumpd3P97770 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.33□□□□□ -0.28
Thumpd3P97770 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Thumpd3P97770 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd3P97770 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd3P97770 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd3P97770 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Thumpd3P97770 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms