Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.34□□□□□ -0.11
Lig3P97386 Gm27516-201ENSMUST00000184237 98 ntBASIC14.34□□□□□ -0.11
Lig3P97386 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.34□□□□□ -0.11
Lig3P97386 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lig3P97386 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lig3P97386 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lig3P97386 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lig3P97386 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.34□□□□□ -0.11
Lig3P97386 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.34□□□□□ -0.11
Lig3P97386 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lig3P97386 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lig3P97386 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lig3P97386 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lig3P97386 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lig3P97386 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lig3P97386 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lig3P97386 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lig3P97386 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.34□□□□□ -0.11
Lig3P97386 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lig3P97386 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lig3P97386 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lig3P97386 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Lig3P97386 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lig3P97386 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lig3P97386 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lig3P97386 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lig3P97386 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Lig3P97386 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lig3P97386 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig3P97386 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig3P97386 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig3P97386 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig3P97386 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig3P97386 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig3P97386 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lig3P97386 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.33□□□□□ -0.12
Lig3P97386 Gm15371-201ENSMUST00000117057 784 ntBASIC14.33□□□□□ -0.12
Lig3P97386 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.33□□□□□ -0.12
Lig3P97386 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig3P97386 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lig3P97386 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lig3P97386 Gm38002-201ENSMUST00000193255 180 ntBASIC14.33□□□□□ -0.12
Lig3P97386 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lig3P97386 Gm18753-201ENSMUST00000201000 566 ntBASIC14.33□□□□□ -0.12
Lig3P97386 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.33□□□□□ -0.12
Lig3P97386 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.33□□□□□ -0.12
Lig3P97386 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig3P97386 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig3P97386 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig3P97386 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.33□□□□□ -0.12
Lig3P97386 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig3P97386 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lig3P97386 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig3P97386 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig3P97386 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig3P97386 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Lig3P97386 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lig3P97386 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Lig3P97386 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig3P97386 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig3P97386 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig3P97386 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig3P97386 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lig3P97386 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lig3P97386 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lig3P97386 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Lig3P97386 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lig3P97386 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lig3P97386 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lig3P97386 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Lig3P97386 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lig3P97386 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lig3P97386 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lig3P97386 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Lig3P97386 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Lig3P97386 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.32□□□□□ -0.12
Lig3P97386 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.32□□□□□ -0.12
Lig3P97386 Gm27501-201ENSMUST00000183599 107 ntBASIC14.32□□□□□ -0.12
Lig3P97386 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Lig3P97386 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Lig3P97386 Gm37714-201ENSMUST00000194742 342 ntBASIC14.32□□□□□ -0.12
Lig3P97386 Gm44364-201ENSMUST00000198368 141 ntBASIC14.32□□□□□ -0.12
Lig3P97386 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Lig3P97386 Gm45930-201ENSMUST00000221330 292 ntBASIC14.32□□□□□ -0.12
Lig3P97386 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.32□□□□□ -0.12
Lig3P97386 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lig3P97386 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lig3P97386 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lig3P97386 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lig3P97386 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Lig3P97386 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lig3P97386 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lig3P97386 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Lig3P97386 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lig3P97386 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.32□□□□□ -0.12
Lig3P97386 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lig3P97386 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lig3P97386 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lig3P97386 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Lig3P97386 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms