Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
PrkdcP97313 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Gm26286-201ENSMUST00000104166 134 ntBASIC8.63□□□□□ -1.03
PrkdcP97313 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
PrkdcP97313 Gm23675-201ENSMUST00000157311 125 ntBASIC8.63□□□□□ -1.03
PrkdcP97313 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC8.63□□□□□ -1.03
PrkdcP97313 Gm7238-201ENSMUST00000206467 973 ntBASIC8.63□□□□□ -1.03
PrkdcP97313 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC8.63□□□□□ -1.03
PrkdcP97313 AC115122.1-201ENSMUST00000224850 1040 ntBASIC8.63□□□□□ -1.03
PrkdcP97313 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Gm5513-201ENSMUST00000072982 1218 ntBASIC8.63□□□□□ -1.03
PrkdcP97313 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Gm13142-201ENSMUST00000117213 1453 ntBASIC8.63□□□□□ -1.03
PrkdcP97313 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
PrkdcP97313 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC8.63□□□□□ -1.03
PrkdcP97313 AC158388.3-202ENSMUST00000225517 775 ntBASIC8.63□□□□□ -1.03
PrkdcP97313 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
PrkdcP97313 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Gm25076-201ENSMUST00000104098 132 ntBASIC8.63□□□□□ -1.03
PrkdcP97313 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC8.63□□□□□ -1.03
PrkdcP97313 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC8.63□□□□□ -1.03
PrkdcP97313 Gm43912-201ENSMUST00000204352 538 ntBASIC8.63□□□□□ -1.03
PrkdcP97313 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PrkdcP97313 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Fbxl12-205ENSMUST00000140702 1555 ntBASIC8.62□□□□□ -1.03
PrkdcP97313 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
PrkdcP97313 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Gm43598-201ENSMUST00000202482 2479 ntBASIC8.62□□□□□ -1.03
PrkdcP97313 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Gm5257-201ENSMUST00000121823 790 ntBASIC8.62□□□□□ -1.03
PrkdcP97313 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC8.62□□□□□ -1.03
PrkdcP97313 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
PrkdcP97313 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
PrkdcP97313 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC8.62□□□□□ -1.03
PrkdcP97313 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
PrkdcP97313 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC8.62□□□□□ -1.03
PrkdcP97313 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
PrkdcP97313 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
PrkdcP97313 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC8.62□□□□□ -1.03
PrkdcP97313 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC8.62□□□□□ -1.03
PrkdcP97313 Gm43969-201ENSMUST00000204833 535 ntBASIC8.62□□□□□ -1.03
PrkdcP97313 Gm45135-201ENSMUST00000206787 1184 ntBASIC8.62□□□□□ -1.03
PrkdcP97313 Gm7192-201ENSMUST00000210793 1137 ntBASIC8.62□□□□□ -1.03
PrkdcP97313 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC8.62□□□□□ -1.03
PrkdcP97313 AC136376.2-201ENSMUST00000228819 490 ntBASIC8.62□□□□□ -1.03
PrkdcP97313 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC8.62□□□□□ -1.03
PrkdcP97313 Gm13910-201ENSMUST00000121752 1428 ntBASIC8.62□□□□□ -1.03
PrkdcP97313 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC8.62□□□□□ -1.03
PrkdcP97313 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms