Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43cP86449 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43cP86449 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43cP86449 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43cP86449 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trim43cP86449 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43cP86449 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43cP86449 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trim43cP86449 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43cP86449 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Trim43cP86449 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.23□□□□□ -0.13
Trim43cP86449 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43cP86449 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43cP86449 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43cP86449 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43cP86449 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.23□□□□□ -0.13
Trim43cP86449 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43cP86449 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43cP86449 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim43cP86449 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim43cP86449 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim43cP86449 Gm27331-201ENSMUST00000183705 60 ntBASIC14.23□□□□□ -0.13
Trim43cP86449 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43cP86449 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim43cP86449 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43cP86449 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43cP86449 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43cP86449 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43cP86449 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43cP86449 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.23□□□□□ -0.13
Trim43cP86449 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43cP86449 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.23□□□□□ -0.13
Trim43cP86449 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43cP86449 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim43cP86449 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim43cP86449 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim43cP86449 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43cP86449 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Trim43cP86449 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43cP86449 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43cP86449 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43cP86449 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43cP86449 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim43cP86449 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43cP86449 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43cP86449 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.22□□□□□ -0.13
Trim43cP86449 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43cP86449 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
Trim43cP86449 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim43cP86449 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43cP86449 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43cP86449 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43cP86449 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim43cP86449 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Trim43cP86449 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.22□□□□□ -0.13
Trim43cP86449 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
Trim43cP86449 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim43cP86449 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.22□□□□□ -0.13
Trim43cP86449 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43cP86449 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Trim43cP86449 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43cP86449 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim43cP86449 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.22□□□□□ -0.13
Trim43cP86449 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim43cP86449 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43cP86449 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43cP86449 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43cP86449 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43cP86449 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trim43cP86449 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43cP86449 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43cP86449 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43cP86449 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43cP86449 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
Trim43cP86449 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43cP86449 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trim43cP86449 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43cP86449 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim43cP86449 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43cP86449 Snord83b-201ENSMUST00000104546 94 ntBASIC14.21□□□□□ -0.13
Trim43cP86449 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim43cP86449 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim43cP86449 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43cP86449 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43cP86449 Gm37922-201ENSMUST00000195596 455 ntBASIC14.21□□□□□ -0.13
Trim43cP86449 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.21□□□□□ -0.13
Trim43cP86449 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
Trim43cP86449 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.21□□□□□ -0.13
Trim43cP86449 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43cP86449 Gm16372-201ENSMUST00000073088 450 ntBASIC14.21□□□□□ -0.13
Trim43cP86449 Gm6091-201ENSMUST00000098307 165 ntBASIC14.21□□□□□ -0.13
Trim43cP86449 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim43cP86449 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43cP86449 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.21□□□□□ -0.14
Trim43cP86449 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.21□□□□□ -0.14
Trim43cP86449 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trim43cP86449 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim43cP86449 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim43cP86449 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.14
Trim43cP86449 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms