Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
SgcbP82349 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SgcbP82349 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.7□□□□□ -0.54
SgcbP82349 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.7□□□□□ -0.54
SgcbP82349 Gm10156-201ENSMUST00000122364 462 ntBASIC11.7□□□□□ -0.54
SgcbP82349 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
SgcbP82349 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.7□□□□□ -0.54
SgcbP82349 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC11.7□□□□□ -0.54
SgcbP82349 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.7□□□□□ -0.54
SgcbP82349 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
SgcbP82349 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.7□□□□□ -0.54
SgcbP82349 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.7□□□□□ -0.54
SgcbP82349 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
SgcbP82349 Gm24196-201ENSMUST00000179161 110 ntBASIC11.7□□□□□ -0.54
SgcbP82349 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
SgcbP82349 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.7□□□□□ -0.54
SgcbP82349 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.7□□□□□ -0.54
SgcbP82349 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.7□□□□□ -0.54
SgcbP82349 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SgcbP82349 Gm44069-201ENSMUST00000204898 506 ntBASIC11.7□□□□□ -0.54
SgcbP82349 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
SgcbP82349 Gm45841-201ENSMUST00000207700 164 ntBASIC11.7□□□□□ -0.54
SgcbP82349 Gm18062-201ENSMUST00000208020 547 ntBASIC11.7□□□□□ -0.54
SgcbP82349 Gm18055-201ENSMUST00000208254 547 ntBASIC11.7□□□□□ -0.54
SgcbP82349 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.7□□□□□ -0.54
SgcbP82349 Gm7561-201ENSMUST00000211203 886 ntBASIC11.7□□□□□ -0.54
SgcbP82349 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.7□□□□□ -0.54
SgcbP82349 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.7□□□□□ -0.54
SgcbP82349 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcbP82349 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcbP82349 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.7□□□□□ -0.54
SgcbP82349 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.7□□□□□ -0.54
SgcbP82349 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SgcbP82349 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcbP82349 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcbP82349 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcbP82349 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcbP82349 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcbP82349 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcbP82349 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
SgcbP82349 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcbP82349 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcbP82349 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcbP82349 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcbP82349 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SgcbP82349 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SgcbP82349 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SgcbP82349 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SgcbP82349 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SgcbP82349 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
SgcbP82349 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SgcbP82349 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SgcbP82349 Gm12203-201ENSMUST00000118235 598 ntBASIC11.69□□□□□ -0.54
SgcbP82349 Gm12209-201ENSMUST00000120089 596 ntBASIC11.69□□□□□ -0.54
SgcbP82349 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SgcbP82349 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SgcbP82349 Gm37922-201ENSMUST00000195596 455 ntBASIC11.69□□□□□ -0.54
SgcbP82349 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.69□□□□□ -0.54
SgcbP82349 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.69□□□□□ -0.54
SgcbP82349 Gm6458-201ENSMUST00000211573 635 ntBASIC11.69□□□□□ -0.54
SgcbP82349 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.69□□□□□ -0.54
SgcbP82349 AC125117.2-201ENSMUST00000228344 1140 ntBASIC11.69□□□□□ -0.54
SgcbP82349 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SgcbP82349 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SgcbP82349 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SgcbP82349 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SgcbP82349 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SgcbP82349 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
SgcbP82349 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SgcbP82349 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SgcbP82349 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SgcbP82349 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SgcbP82349 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SgcbP82349 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.69□□□□□ -0.54
SgcbP82349 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.69□□□□□ -0.54
SgcbP82349 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
SgcbP82349 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
SgcbP82349 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.68□□□□□ -0.54
SgcbP82349 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
SgcbP82349 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
SgcbP82349 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.68□□□□□ -0.54
SgcbP82349 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
SgcbP82349 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.68□□□□□ -0.54
SgcbP82349 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcbP82349 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms