Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.27□□□□□ -0.45
Six5P70178 Gm8598-201ENSMUST00000221184 836 ntBASIC12.27□□□□□ -0.45
Six5P70178 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Six5P70178 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Six5P70178 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Six5P70178 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Six5P70178 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.27□□□□□ -0.45
Six5P70178 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Six5P70178 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Six5P70178 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Six5P70178 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Six5P70178 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Six5P70178 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.27□□□□□ -0.45
Six5P70178 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Six5P70178 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Six5P70178 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Six5P70178 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Six5P70178 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Six5P70178 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Six5P70178 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Six5P70178 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Six5P70178 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Six5P70178 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Six5P70178 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Six5P70178 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Six5P70178 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Six5P70178 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.26□□□□□ -0.45
Six5P70178 Gm11478-201ENSMUST00000117851 599 ntBASIC12.26□□□□□ -0.45
Six5P70178 Gm11618-201ENSMUST00000117946 267 ntBASIC12.26□□□□□ -0.45
Six5P70178 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.26□□□□□ -0.45
Six5P70178 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Six5P70178 Gm7063-201ENSMUST00000186840 981 ntBASIC12.26□□□□□ -0.45
Six5P70178 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.26□□□□□ -0.45
Six5P70178 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.26□□□□□ -0.45
Six5P70178 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.26□□□□□ -0.45
Six5P70178 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.26□□□□□ -0.45
Six5P70178 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.26□□□□□ -0.45
Six5P70178 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Six5P70178 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.26□□□□□ -0.45
Six5P70178 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Six5P70178 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Six5P70178 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Six5P70178 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Six5P70178 Gm10012-201ENSMUST00000078252 192 ntBASIC12.26□□□□□ -0.45
Six5P70178 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Six5P70178 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Six5P70178 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.26□□□□□ -0.45
Six5P70178 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.26□□□□□ -0.45
Six5P70178 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.26□□□□□ -0.45
Six5P70178 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Six5P70178 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Six5P70178 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Six5P70178 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Six5P70178 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Six5P70178 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.26□□□□□ -0.45
Six5P70178 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.26□□□□□ -0.45
Six5P70178 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Six5P70178 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Six5P70178 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.26□□□□□ -0.45
Six5P70178 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Six5P70178 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Six5P70178 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Six5P70178 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Six5P70178 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.25□□□□□ -0.45
Six5P70178 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.25□□□□□ -0.45
Six5P70178 Proscos-202ENSMUST00000178990 666 ntBASIC12.25□□□□□ -0.45
Six5P70178 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Six5P70178 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.25□□□□□ -0.45
Six5P70178 Gm7653-201ENSMUST00000214567 508 ntBASIC12.25□□□□□ -0.45
Six5P70178 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.25□□□□□ -0.45
Six5P70178 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.25□□□□□ -0.45
Six5P70178 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.25□□□□□ -0.45
Six5P70178 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.25□□□□□ -0.45
Six5P70178 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Six5P70178 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms