Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.45□□□□□ -0.1
Hmgb1P63158 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb1P63158 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.45□□□□□ -0.1
Hmgb1P63158 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.45□□□□□ -0.1
Hmgb1P63158 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb1P63158 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.45□□□□□ -0.1
Hmgb1P63158 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb1P63158 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.45□□□□□ -0.1
Hmgb1P63158 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb1P63158 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb1P63158 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.45□□□□□ -0.1
Hmgb1P63158 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb1P63158 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb1P63158 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb1P63158 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.45□□□□□ -0.1
Hmgb1P63158 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb1P63158 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.45□□□□□ -0.1
Hmgb1P63158 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb1P63158 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Hmgb1P63158 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb1P63158 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Hmgb1P63158 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb1P63158 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb1P63158 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb1P63158 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb1P63158 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Hmgb1P63158 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb1P63158 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb1P63158 Gm14057-201ENSMUST00000120631 482 ntBASIC14.44□□□□□ -0.1
Hmgb1P63158 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.44□□□□□ -0.1
Hmgb1P63158 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb1P63158 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.44□□□□□ -0.1
Hmgb1P63158 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb1P63158 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.44□□□□□ -0.1
Hmgb1P63158 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb1P63158 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.44□□□□□ -0.1
Hmgb1P63158 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb1P63158 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb1P63158 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb1P63158 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb1P63158 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Hmgb1P63158 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Hmgb1P63158 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb1P63158 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb1P63158 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb1P63158 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.44□□□□□ -0.1
Hmgb1P63158 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb1P63158 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hmgb1P63158 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb1P63158 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb1P63158 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb1P63158 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb1P63158 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.43□□□□□ -0.1
Hmgb1P63158 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb1P63158 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb1P63158 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.43□□□□□ -0.1
Hmgb1P63158 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Hmgb1P63158 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb1P63158 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb1P63158 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb1P63158 Gm6447-201ENSMUST00000118905 835 ntBASIC14.43□□□□□ -0.1
Hmgb1P63158 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Hmgb1P63158 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.43□□□□□ -0.1
Hmgb1P63158 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb1P63158 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.43□□□□□ -0.1
Hmgb1P63158 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hmgb1P63158 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Hmgb1P63158 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb1P63158 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.43□□□□□ -0.1
Hmgb1P63158 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.43□□□□□ -0.1
Hmgb1P63158 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb1P63158 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb1P63158 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hmgb1P63158 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb1P63158 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb1P63158 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb1P63158 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb1P63158 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb1P63158 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb1P63158 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb1P63158 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb1P63158 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb1P63158 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hmgb1P63158 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb1P63158 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb1P63158 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb1P63158 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb1P63158 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb1P63158 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb1P63158 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb1P63158 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb1P63158 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb1P63158 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb1P63158 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb1P63158 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.42□□□□□ -0.1
Hmgb1P63158 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.42□□□□□ -0.1
Hmgb1P63158 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hmgb1P63158 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.42□□□□□ -0.1
Hmgb1P63158 Gm16215-201ENSMUST00000161990 637 ntBASIC14.42□□□□□ -0.1
Hmgb1P63158 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms