Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.29□□□□□ -0.28
ThraP63058 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.29□□□□□ -0.28
ThraP63058 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.29□□□□□ -0.28
ThraP63058 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ThraP63058 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ThraP63058 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.29□□□□□ -0.28
ThraP63058 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ThraP63058 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
ThraP63058 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ThraP63058 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ThraP63058 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ThraP63058 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
ThraP63058 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ThraP63058 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ThraP63058 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ThraP63058 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ThraP63058 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ThraP63058 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ThraP63058 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ThraP63058 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ThraP63058 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
ThraP63058 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ThraP63058 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ThraP63058 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.28□□□□□ -0.28
ThraP63058 Gm12742-201ENSMUST00000117326 410 ntBASIC13.28□□□□□ -0.28
ThraP63058 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ThraP63058 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.28□□□□□ -0.28
ThraP63058 Gm8652-201ENSMUST00000181363 964 ntBASIC13.28□□□□□ -0.28
ThraP63058 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.28□□□□□ -0.28
ThraP63058 Gm6983-201ENSMUST00000214912 628 ntBASIC13.28□□□□□ -0.28
ThraP63058 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.28□□□□□ -0.28
ThraP63058 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ThraP63058 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ThraP63058 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ThraP63058 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.28□□□□□ -0.28
ThraP63058 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ThraP63058 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ThraP63058 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ThraP63058 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ThraP63058 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ThraP63058 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.28□□□□□ -0.28
ThraP63058 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.28□□□□□ -0.28
ThraP63058 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ThraP63058 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.28□□□□□ -0.28
ThraP63058 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ThraP63058 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ThraP63058 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ThraP63058 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ThraP63058 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.28□□□□□ -0.28
ThraP63058 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
ThraP63058 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ThraP63058 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ThraP63058 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ThraP63058 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
ThraP63058 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.27□□□□□ -0.28
ThraP63058 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
ThraP63058 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ThraP63058 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
ThraP63058 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
ThraP63058 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ThraP63058 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ThraP63058 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ThraP63058 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.27□□□□□ -0.29
ThraP63058 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ThraP63058 Gm15371-201ENSMUST00000117057 784 ntBASIC13.27□□□□□ -0.29
ThraP63058 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.27□□□□□ -0.29
ThraP63058 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.27□□□□□ -0.29
ThraP63058 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.27□□□□□ -0.29
ThraP63058 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.27□□□□□ -0.29
ThraP63058 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.27□□□□□ -0.29
ThraP63058 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.27□□□□□ -0.29
ThraP63058 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ThraP63058 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ThraP63058 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
ThraP63058 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
ThraP63058 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.27□□□□□ -0.29
ThraP63058 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ThraP63058 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ThraP63058 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ThraP63058 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ThraP63058 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ThraP63058 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ThraP63058 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.27□□□□□ -0.29
ThraP63058 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ThraP63058 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ThraP63058 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
ThraP63058 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ThraP63058 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ThraP63058 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ThraP63058 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
ThraP63058 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ThraP63058 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.27□□□□□ -0.29
ThraP63058 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
ThraP63058 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ThraP63058 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
ThraP63058 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
ThraP63058 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms