Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39P62892 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39P62892 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC9.32□□□□□ -0.92
Rpl39P62892 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Rpl39P62892 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC9.32□□□□□ -0.92
Rpl39P62892 Gm37391-201ENSMUST00000194891 2318 ntBASIC9.32□□□□□ -0.92
Rpl39P62892 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC9.32□□□□□ -0.92
Rpl39P62892 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39P62892 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC9.32□□□□□ -0.92
Rpl39P62892 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39P62892 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Rpl39P62892 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39P62892 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39P62892 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Rpl39P62892 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39P62892 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39P62892 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Rpl39P62892 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39P62892 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC9.31□□□□□ -0.92
Rpl39P62892 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC9.31□□□□□ -0.92
Rpl39P62892 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Rpl39P62892 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Rpl39P62892 Gm44292-201ENSMUST00000205194 2364 ntBASIC9.31□□□□□ -0.92
Rpl39P62892 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC9.31□□□□□ -0.92
Rpl39P62892 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Rpl39P62892 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Rpl39P62892 Gm15393-201ENSMUST00000120499 219 ntBASIC9.31□□□□□ -0.92
Rpl39P62892 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC9.31□□□□□ -0.92
Rpl39P62892 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC9.31□□□□□ -0.92
Rpl39P62892 Gm43125-201ENSMUST00000201724 730 ntBASIC9.31□□□□□ -0.92
Rpl39P62892 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Rpl39P62892 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Rpl39P62892 Gm10175-201ENSMUST00000086013 645 ntBASIC9.31□□□□□ -0.92
Rpl39P62892 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Rpl39P62892 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Gm8798-201ENSMUST00000211877 1661 ntBASIC9.31□□□□□ -0.92
Rpl39P62892 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Rpl39P62892 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Rpl39P62892 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
Rpl39P62892 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC9.31□□□□□ -0.92
Rpl39P62892 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC9.31□□□□□ -0.92
Rpl39P62892 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC9.31□□□□□ -0.92
Rpl39P62892 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Gm18263-201ENSMUST00000220846 1928 ntBASIC9.31□□□□□ -0.92
Rpl39P62892 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Rpl39P62892 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39P62892 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39P62892 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms