Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Lim2P56563 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lim2P56563 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lim2P56563 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Lim2P56563 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Lim2P56563 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.1□□□□□ -0.31
Lim2P56563 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.1□□□□□ -0.31
Lim2P56563 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 Gm16202-201ENSMUST00000117532 544 ntBASIC13.1□□□□□ -0.31
Lim2P56563 Gm14127-201ENSMUST00000117906 678 ntBASIC13.1□□□□□ -0.31
Lim2P56563 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.1□□□□□ -0.31
Lim2P56563 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.1□□□□□ -0.31
Lim2P56563 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Lim2P56563 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.1□□□□□ -0.31
Lim2P56563 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.1□□□□□ -0.31
Lim2P56563 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.1□□□□□ -0.31
Lim2P56563 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.1□□□□□ -0.31
Lim2P56563 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.1□□□□□ -0.31
Lim2P56563 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.1□□□□□ -0.31
Lim2P56563 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Lim2P56563 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Lim2P56563 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Lim2P56563 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.1□□□□□ -0.31
Lim2P56563 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lim2P56563 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lim2P56563 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lim2P56563 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lim2P56563 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lim2P56563 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lim2P56563 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lim2P56563 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lim2P56563 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lim2P56563 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.09□□□□□ -0.31
Lim2P56563 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lim2P56563 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lim2P56563 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lim2P56563 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lim2P56563 Gm12203-201ENSMUST00000118235 598 ntBASIC13.09□□□□□ -0.31
Lim2P56563 Gm12209-201ENSMUST00000120089 596 ntBASIC13.09□□□□□ -0.31
Lim2P56563 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lim2P56563 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lim2P56563 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.09□□□□□ -0.31
Lim2P56563 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lim2P56563 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.09□□□□□ -0.31
Lim2P56563 Gm44069-201ENSMUST00000204898 506 ntBASIC13.09□□□□□ -0.31
Lim2P56563 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.09□□□□□ -0.31
Lim2P56563 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.09□□□□□ -0.31
Lim2P56563 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lim2P56563 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.09□□□□□ -0.31
Lim2P56563 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.09□□□□□ -0.31
Lim2P56563 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lim2P56563 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lim2P56563 Gm25857-201ENSMUST00000082788 129 ntBASIC13.09□□□□□ -0.31
Lim2P56563 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lim2P56563 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lim2P56563 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lim2P56563 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.09□□□□□ -0.31
Lim2P56563 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Lim2P56563 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lim2P56563 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lim2P56563 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lim2P56563 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Lim2P56563 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Lim2P56563 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lim2P56563 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lim2P56563 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lim2P56563 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lim2P56563 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lim2P56563 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lim2P56563 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lim2P56563 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lim2P56563 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lim2P56563 Gm11618-201ENSMUST00000117946 267 ntBASIC13.08□□□□□ -0.32
Lim2P56563 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lim2P56563 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lim2P56563 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms