Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.95□□□□□ -0.18
NrlP54846 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
NrlP54846 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NrlP54846 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.95□□□□□ -0.18
NrlP54846 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.95□□□□□ -0.18
NrlP54846 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NrlP54846 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.94□□□□□ -0.18
NrlP54846 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
NrlP54846 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.94□□□□□ -0.18
NrlP54846 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.94□□□□□ -0.18
NrlP54846 Gm26461-201ENSMUST00000175064 290 ntBASIC13.94□□□□□ -0.18
NrlP54846 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NrlP54846 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.94□□□□□ -0.18
NrlP54846 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Gm21769-201ENSMUST00000211922 111 ntBASIC13.94□□□□□ -0.18
NrlP54846 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
NrlP54846 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
NrlP54846 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.94□□□□□ -0.18
NrlP54846 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
NrlP54846 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NrlP54846 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NrlP54846 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NrlP54846 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NrlP54846 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NrlP54846 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.93□□□□□ -0.18
NrlP54846 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NrlP54846 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NrlP54846 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
NrlP54846 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.93□□□□□ -0.18
NrlP54846 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.93□□□□□ -0.18
NrlP54846 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NrlP54846 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.93□□□□□ -0.18
NrlP54846 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NrlP54846 Gm25668-201ENSMUST00000157700 129 ntBASIC13.93□□□□□ -0.18
NrlP54846 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.93□□□□□ -0.18
NrlP54846 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NrlP54846 Gm20482-202ENSMUST00000174729 825 ntBASIC13.93□□□□□ -0.18
NrlP54846 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NrlP54846 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.93□□□□□ -0.18
NrlP54846 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NrlP54846 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.93□□□□□ -0.18
NrlP54846 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NrlP54846 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NrlP54846 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NrlP54846 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NrlP54846 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NrlP54846 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NrlP54846 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
NrlP54846 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NrlP54846 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NrlP54846 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NrlP54846 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.93□□□□□ -0.18
NrlP54846 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NrlP54846 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NrlP54846 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NrlP54846 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NrlP54846 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NrlP54846 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NrlP54846 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NrlP54846 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NrlP54846 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NrlP54846 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NrlP54846 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.92□□□□□ -0.18
NrlP54846 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NrlP54846 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.92□□□□□ -0.18
NrlP54846 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NrlP54846 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NrlP54846 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
NrlP54846 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NrlP54846 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NrlP54846 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms