Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fdft1P53798 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fdft1P53798 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fdft1P53798 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fdft1P53798 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Fdft1P53798 Mir874-201ENSMUST00000104769 76 ntBASIC13.1□□□□□ -0.31
Fdft1P53798 Gm7488-201ENSMUST00000117148 684 ntBASIC13.1□□□□□ -0.31
Fdft1P53798 Gm12859-201ENSMUST00000117834 427 ntBASIC13.1□□□□□ -0.31
Fdft1P53798 Gm12341-201ENSMUST00000119724 503 ntBASIC13.1□□□□□ -0.31
Fdft1P53798 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.1□□□□□ -0.31
Fdft1P53798 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.1□□□□□ -0.31
Fdft1P53798 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.1□□□□□ -0.31
Fdft1P53798 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.1□□□□□ -0.31
Fdft1P53798 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Fdft1P53798 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Fdft1P53798 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.1□□□□□ -0.31
Fdft1P53798 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fdft1P53798 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Fdft1P53798 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fdft1P53798 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Fdft1P53798 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fdft1P53798 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Fdft1P53798 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fdft1P53798 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.1□□□□□ -0.31
Fdft1P53798 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Fdft1P53798 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Fdft1P53798 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fdft1P53798 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Fdft1P53798 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fdft1P53798 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fdft1P53798 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Fdft1P53798 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fdft1P53798 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Fdft1P53798 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fdft1P53798 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Fdft1P53798 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fdft1P53798 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.09□□□□□ -0.31
Fdft1P53798 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fdft1P53798 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Fdft1P53798 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Fdft1P53798 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fdft1P53798 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fdft1P53798 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fdft1P53798 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Fdft1P53798 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Fdft1P53798 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Fdft1P53798 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Fdft1P53798 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fdft1P53798 Gm37917-201ENSMUST00000194711 392 ntBASIC13.09□□□□□ -0.31
Fdft1P53798 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fdft1P53798 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.09□□□□□ -0.31
Fdft1P53798 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.09□□□□□ -0.31
Fdft1P53798 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fdft1P53798 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Fdft1P53798 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fdft1P53798 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fdft1P53798 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fdft1P53798 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.09□□□□□ -0.31
Fdft1P53798 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.09□□□□□ -0.31
Fdft1P53798 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fdft1P53798 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Fdft1P53798 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fdft1P53798 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fdft1P53798 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Fdft1P53798 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Fdft1P53798 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Fdft1P53798 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fdft1P53798 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fdft1P53798 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fdft1P53798 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Fdft1P53798 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Fdft1P53798 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Fdft1P53798 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Fdft1P53798 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Fdft1P53798 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Fdft1P53798 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Fdft1P53798 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fdft1P53798 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fdft1P53798 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fdft1P53798 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Fdft1P53798 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fdft1P53798 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Fdft1P53798 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Fdft1P53798 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fdft1P53798 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.08□□□□□ -0.32
Fdft1P53798 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Fdft1P53798 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Fdft1P53798 Gm13689-201ENSMUST00000119360 685 ntBASIC13.08□□□□□ -0.32
Fdft1P53798 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.08□□□□□ -0.32
Fdft1P53798 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Fdft1P53798 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.08□□□□□ -0.32
Fdft1P53798 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.08□□□□□ -0.32
Fdft1P53798 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.08□□□□□ -0.32
Fdft1P53798 Gm5866-201ENSMUST00000177881 973 ntBASIC13.08□□□□□ -0.32
Fdft1P53798 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Fdft1P53798 Gm38223-201ENSMUST00000194484 695 ntBASIC13.08□□□□□ -0.32
Fdft1P53798 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.08□□□□□ -0.32
Fdft1P53798 Gm18307-201ENSMUST00000206864 949 ntBASIC13.08□□□□□ -0.32
Fdft1P53798 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.08□□□□□ -0.32
Fdft1P53798 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms