Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.41□□□□□ -0.42
RoraP51448 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.41□□□□□ -0.42
RoraP51448 Gm38002-201ENSMUST00000193255 180 ntBASIC12.41□□□□□ -0.42
RoraP51448 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RoraP51448 Gm6013-201ENSMUST00000212264 699 ntBASIC12.41□□□□□ -0.42
RoraP51448 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.41□□□□□ -0.42
RoraP51448 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.41□□□□□ -0.42
RoraP51448 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.41□□□□□ -0.42
RoraP51448 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RoraP51448 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
RoraP51448 Gm7399-201ENSMUST00000032395 858 ntBASIC12.41□□□□□ -0.42
RoraP51448 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RoraP51448 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
RoraP51448 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RoraP51448 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
RoraP51448 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RoraP51448 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RoraP51448 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RoraP51448 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RoraP51448 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RoraP51448 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RoraP51448 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RoraP51448 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RoraP51448 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RoraP51448 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.41□□□□□ -0.42
RoraP51448 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RoraP51448 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RoraP51448 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RoraP51448 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RoraP51448 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RoraP51448 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
RoraP51448 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.4□□□□□ -0.42
RoraP51448 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RoraP51448 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
RoraP51448 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.4□□□□□ -0.42
RoraP51448 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
RoraP51448 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RoraP51448 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RoraP51448 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RoraP51448 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RoraP51448 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RoraP51448 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RoraP51448 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RoraP51448 Matn2-206ENSMUST00000228570 2798 ntBASIC12.4□□□□□ -0.42
RoraP51448 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RoraP51448 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RoraP51448 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RoraP51448 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RoraP51448 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
RoraP51448 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.4□□□□□ -0.42
RoraP51448 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.4□□□□□ -0.42
RoraP51448 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.4□□□□□ -0.42
RoraP51448 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RoraP51448 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.4□□□□□ -0.42
RoraP51448 Gm45880-201ENSMUST00000213041 853 ntBASIC12.4□□□□□ -0.42
RoraP51448 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.4□□□□□ -0.42
RoraP51448 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.4□□□□□ -0.42
RoraP51448 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RoraP51448 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RoraP51448 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RoraP51448 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
RoraP51448 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
RoraP51448 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RoraP51448 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
RoraP51448 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RoraP51448 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RoraP51448 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
RoraP51448 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RoraP51448 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RoraP51448 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
RoraP51448 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
RoraP51448 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
RoraP51448 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
RoraP51448 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
RoraP51448 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.4□□□□□ -0.43
RoraP51448 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RoraP51448 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
RoraP51448 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RoraP51448 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RoraP51448 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RoraP51448 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RoraP51448 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RoraP51448 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.39□□□□□ -0.43
RoraP51448 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RoraP51448 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
RoraP51448 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RoraP51448 Mir686-201ENSMUST00000102174 109 ntBASIC12.39□□□□□ -0.43
RoraP51448 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RoraP51448 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.39□□□□□ -0.43
RoraP51448 Mir1247-201ENSMUST00000116706 82 ntBASIC12.39□□□□□ -0.43
RoraP51448 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RoraP51448 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.39□□□□□ -0.43
RoraP51448 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.39□□□□□ -0.43
RoraP51448 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
RoraP51448 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.39□□□□□ -0.43
RoraP51448 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.39□□□□□ -0.43
RoraP51448 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.39□□□□□ -0.43
RoraP51448 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.39□□□□□ -0.43
RoraP51448 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.39□□□□□ -0.43
RoraP51448 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms