Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Gm15460-201ENSMUST00000118147 391 ntBASIC10.86□□□□□ -0.67
Nkx2-1P50220 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Gm26308-201ENSMUST00000157768 69 ntBASIC10.86□□□□□ -0.67
Nkx2-1P50220 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Gm24420-201ENSMUST00000176676 59 ntBASIC10.86□□□□□ -0.67
Nkx2-1P50220 Gm6283-201ENSMUST00000182369 1000 ntBASIC10.86□□□□□ -0.67
Nkx2-1P50220 Gm18766-201ENSMUST00000189811 808 ntBASIC10.86□□□□□ -0.67
Nkx2-1P50220 Gm7774-201ENSMUST00000200064 533 ntBASIC10.86□□□□□ -0.67
Nkx2-1P50220 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC10.86□□□□□ -0.67
Nkx2-1P50220 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC10.86□□□□□ -0.67
Nkx2-1P50220 AC090659.2-201ENSMUST00000225378 1186 ntBASIC10.86□□□□□ -0.67
Nkx2-1P50220 Gm8396-201ENSMUST00000057361 823 ntBASIC10.86□□□□□ -0.67
Nkx2-1P50220 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Nkx2-1P50220 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-1P50220 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Gm4804-201ENSMUST00000182234 999 ntBASIC10.85□□□□□ -0.67
Nkx2-1P50220 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Nkx2-1P50220 AC153872.1-201ENSMUST00000199539 128 ntBASIC10.85□□□□□ -0.67
Nkx2-1P50220 Gm16476-201ENSMUST00000221544 139 ntBASIC10.85□□□□□ -0.67
Nkx2-1P50220 AC154621.1-201ENSMUST00000226155 1119 ntBASIC10.85□□□□□ -0.67
Nkx2-1P50220 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Gm13517-201ENSMUST00000120782 1495 ntBASIC10.85□□□□□ -0.67
Nkx2-1P50220 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-1P50220 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.84□□□□□ -0.67
Nkx2-1P50220 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Nkx2-1P50220 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms