Protein–RNA interactions for Protein: P50207

Hoxc13, Homeobox protein Hox-C13, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc13P50207 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc13P50207 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc13P50207 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc13P50207 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc13P50207 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc13P50207 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.22□□□□□ -0.13
Hoxc13P50207 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.22□□□□□ -0.13
Hoxc13P50207 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hoxc13P50207 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.22□□□□□ -0.13
Hoxc13P50207 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc13P50207 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.22□□□□□ -0.13
Hoxc13P50207 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.22□□□□□ -0.13
Hoxc13P50207 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
Hoxc13P50207 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc13P50207 Gm6007-201ENSMUST00000208170 823 ntBASIC14.22□□□□□ -0.13
Hoxc13P50207 Gm18935-201ENSMUST00000212692 664 ntBASIC14.22□□□□□ -0.13
Hoxc13P50207 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc13P50207 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.22□□□□□ -0.13
Hoxc13P50207 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hoxc13P50207 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc13P50207 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc13P50207 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc13P50207 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Hoxc13P50207 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc13P50207 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc13P50207 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.21□□□□□ -0.13
Hoxc13P50207 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hoxc13P50207 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
Hoxc13P50207 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc13P50207 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc13P50207 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc13P50207 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc13P50207 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.21□□□□□ -0.13
Hoxc13P50207 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc13P50207 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc13P50207 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Hoxc13P50207 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc13P50207 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.21□□□□□ -0.13
Hoxc13P50207 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc13P50207 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.21□□□□□ -0.13
Hoxc13P50207 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc13P50207 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.21□□□□□ -0.13
Hoxc13P50207 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.21□□□□□ -0.13
Hoxc13P50207 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.21□□□□□ -0.13
Hoxc13P50207 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.21□□□□□ -0.13
Hoxc13P50207 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.21□□□□□ -0.13
Hoxc13P50207 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.21□□□□□ -0.13
Hoxc13P50207 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc13P50207 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc13P50207 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hoxc13P50207 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc13P50207 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc13P50207 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc13P50207 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.21□□□□□ -0.13
Hoxc13P50207 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc13P50207 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Hoxc13P50207 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxc13P50207 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxc13P50207 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxc13P50207 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxc13P50207 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxc13P50207 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Hoxc13P50207 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Hoxc13P50207 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc13P50207 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.2□□□□□ -0.14
Hoxc13P50207 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc13P50207 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Hoxc13P50207 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc13P50207 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc13P50207 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc13P50207 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc13P50207 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.2□□□□□ -0.14
Hoxc13P50207 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hoxc13P50207 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Hoxc13P50207 Gm8018-201ENSMUST00000173536 789 ntBASIC14.2□□□□□ -0.14
Hoxc13P50207 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.2□□□□□ -0.14
Hoxc13P50207 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.2□□□□□ -0.14
Hoxc13P50207 Gm43179-201ENSMUST00000198797 275 ntBASIC14.2□□□□□ -0.14
Hoxc13P50207 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.2□□□□□ -0.14
Hoxc13P50207 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.2□□□□□ -0.14
Hoxc13P50207 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.2□□□□□ -0.14
Hoxc13P50207 Morn2-202ENSMUST00000227729 656 ntBASIC14.2□□□□□ -0.14
Hoxc13P50207 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc13P50207 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.2□□□□□ -0.14
Hoxc13P50207 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc13P50207 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Hoxc13P50207 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc13P50207 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc13P50207 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc13P50207 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc13P50207 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc13P50207 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc13P50207 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc13P50207 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc13P50207 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc13P50207 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.2□□□□□ -0.14
Hoxc13P50207 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc13P50207 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc13P50207 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc13P50207 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms