Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brca1P48754 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brca1P48754 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Brca1P48754 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Brca1P48754 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brca1P48754 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brca1P48754 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Brca1P48754 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Brca1P48754 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Brca1P48754 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brca1P48754 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.42□□□□□ -0.1
Brca1P48754 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brca1P48754 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Brca1P48754 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brca1P48754 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brca1P48754 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brca1P48754 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Brca1P48754 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.42□□□□□ -0.1
Brca1P48754 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brca1P48754 Gm25517-201ENSMUST00000083865 134 ntBASIC14.42□□□□□ -0.1
Brca1P48754 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brca1P48754 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brca1P48754 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Brca1P48754 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brca1P48754 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brca1P48754 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Brca1P48754 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Brca1P48754 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Brca1P48754 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Brca1P48754 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.42□□□□□ -0.1
Brca1P48754 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.42□□□□□ -0.1
Brca1P48754 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brca1P48754 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brca1P48754 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brca1P48754 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Brca1P48754 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brca1P48754 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.41□□□□□ -0.1
Brca1P48754 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Brca1P48754 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Brca1P48754 AY036118-201ENSMUST00000200021 923 ntBASIC14.41□□□□□ -0.1
Brca1P48754 Mir7686-201ENSMUST00000200604 57 ntBASIC14.41□□□□□ -0.1
Brca1P48754 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brca1P48754 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brca1P48754 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brca1P48754 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Brca1P48754 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brca1P48754 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brca1P48754 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brca1P48754 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Brca1P48754 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brca1P48754 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Brca1P48754 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Brca1P48754 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brca1P48754 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brca1P48754 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brca1P48754 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brca1P48754 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brca1P48754 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brca1P48754 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brca1P48754 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brca1P48754 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Brca1P48754 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brca1P48754 Mup-ps26-201ENSMUST00000121751 202 ntBASIC14.41□□□□□ -0.1
Brca1P48754 Gm16397-201ENSMUST00000122201 494 ntBASIC14.41□□□□□ -0.1
Brca1P48754 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.41□□□□□ -0.1
Brca1P48754 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC14.41□□□□□ -0.1
Brca1P48754 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Brca1P48754 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Brca1P48754 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC14.41□□□□□ -0.1
Brca1P48754 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.41□□□□□ -0.1
Brca1P48754 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.41□□□□□ -0.1
Brca1P48754 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Brca1P48754 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brca1P48754 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brca1P48754 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brca1P48754 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Brca1P48754 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brca1P48754 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brca1P48754 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brca1P48754 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brca1P48754 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brca1P48754 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brca1P48754 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brca1P48754 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brca1P48754 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brca1P48754 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Brca1P48754 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC14.4□□□□□ -0.1
Brca1P48754 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Brca1P48754 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.4□□□□□ -0.1
Brca1P48754 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.4□□□□□ -0.1
Brca1P48754 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brca1P48754 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brca1P48754 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brca1P48754 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brca1P48754 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brca1P48754 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brca1P48754 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Brca1P48754 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Brca1P48754 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
Brca1P48754 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.4□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms