Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx2P48379 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.74□□□□□ -0.21
Rfx2P48379 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.74□□□□□ -0.21
Rfx2P48379 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx2P48379 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx2P48379 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Rfx2P48379 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Rfx2P48379 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Rfx2P48379 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx2P48379 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx2P48379 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
Rfx2P48379 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx2P48379 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx2P48379 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.74□□□□□ -0.21
Rfx2P48379 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx2P48379 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx2P48379 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx2P48379 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx2P48379 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx2P48379 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx2P48379 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.73□□□□□ -0.21
Rfx2P48379 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx2P48379 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx2P48379 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Rfx2P48379 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx2P48379 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx2P48379 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx2P48379 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.73□□□□□ -0.21
Rfx2P48379 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.73□□□□□ -0.21
Rfx2P48379 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx2P48379 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Rfx2P48379 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.73□□□□□ -0.21
Rfx2P48379 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.73□□□□□ -0.21
Rfx2P48379 Gm27514-201ENSMUST00000183692 110 ntBASIC13.73□□□□□ -0.21
Rfx2P48379 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx2P48379 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx2P48379 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx2P48379 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx2P48379 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.73□□□□□ -0.21
Rfx2P48379 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx2P48379 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx2P48379 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx2P48379 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx2P48379 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx2P48379 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Rfx2P48379 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx2P48379 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx2P48379 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Rfx2P48379 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx2P48379 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.73□□□□□ -0.21
Rfx2P48379 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Rfx2P48379 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.72□□□□□ -0.21
Rfx2P48379 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.72□□□□□ -0.21
Rfx2P48379 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
Rfx2P48379 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.72□□□□□ -0.21
Rfx2P48379 Gm5187-201ENSMUST00000117317 991 ntBASIC13.72□□□□□ -0.21
Rfx2P48379 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.72□□□□□ -0.21
Rfx2P48379 Gm37922-201ENSMUST00000195596 455 ntBASIC13.72□□□□□ -0.21
Rfx2P48379 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.72□□□□□ -0.21
Rfx2P48379 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Rfx2P48379 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Rfx2P48379 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rfx2P48379 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.72□□□□□ -0.21
Rfx2P48379 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.72□□□□□ -0.21
Rfx2P48379 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Rfx2P48379 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.72□□□□□ -0.21
Rfx2P48379 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.72□□□□□ -0.21
Rfx2P48379 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.72□□□□□ -0.21
Rfx2P48379 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx2P48379 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.72□□□□□ -0.21
Rfx2P48379 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx2P48379 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx2P48379 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx2P48379 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx2P48379 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms