Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gli1P47806 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gli1P47806 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gli1P47806 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gli1P47806 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Gli1P47806 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gli1P47806 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Gli1P47806 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gli1P47806 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Gli1P47806 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gli1P47806 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gli1P47806 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gli1P47806 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gli1P47806 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gli1P47806 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gli1P47806 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.81□□□□□ -0.36
Gli1P47806 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gli1P47806 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gli1P47806 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gli1P47806 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gli1P47806 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gli1P47806 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gli1P47806 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gli1P47806 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gli1P47806 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gli1P47806 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gli1P47806 Gm13385-201ENSMUST00000121089 220 ntBASIC12.8□□□□□ -0.36
Gli1P47806 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gli1P47806 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.8□□□□□ -0.36
Gli1P47806 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.8□□□□□ -0.36
Gli1P47806 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.8□□□□□ -0.36
Gli1P47806 Gm5035-201ENSMUST00000215581 927 ntBASIC12.8□□□□□ -0.36
Gli1P47806 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.8□□□□□ -0.36
Gli1P47806 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.8□□□□□ -0.36
Gli1P47806 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Gli1P47806 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gli1P47806 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Gli1P47806 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gli1P47806 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gli1P47806 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gli1P47806 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gli1P47806 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gli1P47806 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gli1P47806 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gli1P47806 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.8□□□□□ -0.36
Gli1P47806 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.8□□□□□ -0.36
Gli1P47806 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gli1P47806 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gli1P47806 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gli1P47806 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Gli1P47806 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.79□□□□□ -0.36
Gli1P47806 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Gli1P47806 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Gli1P47806 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.79□□□□□ -0.36
Gli1P47806 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Gm15678-201ENSMUST00000117573 960 ntBASIC12.79□□□□□ -0.36
Gli1P47806 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.79□□□□□ -0.36
Gli1P47806 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.79□□□□□ -0.36
Gli1P47806 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 AY702102-202ENSMUST00000194651 1173 ntBASIC12.79□□□□□ -0.36
Gli1P47806 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.79□□□□□ -0.36
Gli1P47806 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.79□□□□□ -0.36
Gli1P47806 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.79□□□□□ -0.36
Gli1P47806 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.79□□□□□ -0.36
Gli1P47806 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.79□□□□□ -0.36
Gli1P47806 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Gli1P47806 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Gli1P47806 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gli1P47806 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gli1P47806 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gli1P47806 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gli1P47806 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms