Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HttP42859 Gm8701-201ENSMUST00000169259 874 ntBASIC13.54□□□□□ -0.24
HttP42859 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
HttP42859 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.54□□□□□ -0.24
HttP42859 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HttP42859 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HttP42859 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HttP42859 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.53□□□□□ -0.24
HttP42859 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HttP42859 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HttP42859 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HttP42859 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC13.53□□□□□ -0.24
HttP42859 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.53□□□□□ -0.24
HttP42859 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HttP42859 Gm6855-201ENSMUST00000206307 790 ntBASIC13.53□□□□□ -0.24
HttP42859 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.53□□□□□ -0.24
HttP42859 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
HttP42859 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HttP42859 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HttP42859 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HttP42859 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HttP42859 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HttP42859 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HttP42859 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HttP42859 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HttP42859 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HttP42859 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HttP42859 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC13.53□□□□□ -0.24
HttP42859 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
HttP42859 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC13.53□□□□□ -0.24
HttP42859 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.53□□□□□ -0.24
HttP42859 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HttP42859 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC13.53□□□□□ -0.24
HttP42859 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.53□□□□□ -0.24
HttP42859 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HttP42859 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HttP42859 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.53□□□□□ -0.24
HttP42859 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HttP42859 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HttP42859 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HttP42859 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HttP42859 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HttP42859 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.53□□□□□ -0.24
HttP42859 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HttP42859 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.53□□□□□ -0.24
HttP42859 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC13.53□□□□□ -0.24
HttP42859 Gm15003-201ENSMUST00000118884 446 ntBASIC13.53□□□□□ -0.24
HttP42859 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
HttP42859 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HttP42859 Gm8531-201ENSMUST00000188319 893 ntBASIC13.53□□□□□ -0.24
HttP42859 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HttP42859 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.53□□□□□ -0.24
HttP42859 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HttP42859 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.52□□□□□ -0.24
HttP42859 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.52□□□□□ -0.24
HttP42859 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HttP42859 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
HttP42859 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HttP42859 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HttP42859 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.52□□□□□ -0.24
HttP42859 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
HttP42859 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HttP42859 Gm11509-201ENSMUST00000117358 325 ntBASIC13.52□□□□□ -0.24
HttP42859 Gm12030-201ENSMUST00000121917 223 ntBASIC13.52□□□□□ -0.24
HttP42859 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.52□□□□□ -0.24
HttP42859 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.52□□□□□ -0.24
HttP42859 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.52□□□□□ -0.24
HttP42859 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.52□□□□□ -0.24
HttP42859 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HttP42859 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HttP42859 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HttP42859 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HttP42859 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HttP42859 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HttP42859 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HttP42859 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
HttP42859 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HttP42859 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
HttP42859 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HttP42859 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HttP42859 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
HttP42859 Gm24891-201ENSMUST00000104391 136 ntBASIC13.52□□□□□ -0.25
HttP42859 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
HttP42859 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC13.52□□□□□ -0.25
HttP42859 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HttP42859 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HttP42859 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HttP42859 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HttP42859 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
HttP42859 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC13.51□□□□□ -0.25
HttP42859 Gm20414-201ENSMUST00000172918 646 ntBASIC13.51□□□□□ -0.25
HttP42859 Gm8100-201ENSMUST00000182906 988 ntBASIC13.51□□□□□ -0.25
HttP42859 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
HttP42859 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
HttP42859 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HttP42859 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HttP42859 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HttP42859 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HttP42859 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.51□□□□□ -0.25
HttP42859 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms