Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.54□□□□□ -0.4
Tnfsf9P41274 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Gm23931-201ENSMUST00000103842 109 ntBASIC12.54□□□□□ -0.4
Tnfsf9P41274 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.54□□□□□ -0.4
Tnfsf9P41274 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.54□□□□□ -0.4
Tnfsf9P41274 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.54□□□□□ -0.4
Tnfsf9P41274 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.54□□□□□ -0.4
Tnfsf9P41274 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf9P41274 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.53□□□□□ -0.4
Tnfsf9P41274 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.53□□□□□ -0.4
Tnfsf9P41274 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Tnfsf9P41274 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.53□□□□□ -0.4
Tnfsf9P41274 Gm25927-201ENSMUST00000175058 117 ntBASIC12.53□□□□□ -0.4
Tnfsf9P41274 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.53□□□□□ -0.4
Tnfsf9P41274 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.53□□□□□ -0.4
Tnfsf9P41274 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.53□□□□□ -0.4
Tnfsf9P41274 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.53□□□□□ -0.4
Tnfsf9P41274 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Gm7399-201ENSMUST00000032395 858 ntBASIC12.53□□□□□ -0.4
Tnfsf9P41274 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.53□□□□□ -0.4
Tnfsf9P41274 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf9P41274 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.53□□□□□ -0.4
Tnfsf9P41274 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfsf9P41274 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfsf9P41274 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfsf9P41274 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfsf9P41274 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfsf9P41274 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfsf9P41274 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Tnfsf9P41274 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.52□□□□□ -0.4
Tnfsf9P41274 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfsf9P41274 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfsf9P41274 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.52□□□□□ -0.41
Tnfsf9P41274 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf9P41274 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf9P41274 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms