Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1P40201 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1P40201 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1P40201 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC19.19■□□□□ 0.66
Chd1P40201 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Chd1P40201 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1P40201 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1P40201 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1P40201 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC19.19■□□□□ 0.66
Chd1P40201 Gm3017-201ENSMUST00000203603 1126 ntBASIC19.19■□□□□ 0.66
Chd1P40201 Gm18204-201ENSMUST00000209835 793 ntBASIC19.19■□□□□ 0.66
Chd1P40201 Gm45856-201ENSMUST00000212752 416 ntBASIC19.19■□□□□ 0.66
Chd1P40201 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Chd1P40201 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1P40201 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1P40201 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1P40201 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd1P40201 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Chd1P40201 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Chd1P40201 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd1P40201 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd1P40201 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chd1P40201 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd1P40201 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd1P40201 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd1P40201 Gm14274-201ENSMUST00000117182 615 ntBASIC19.18■□□□□ 0.66
Chd1P40201 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC19.18■□□□□ 0.66
Chd1P40201 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chd1P40201 Gm18201-201ENSMUST00000174735 875 ntBASIC19.18■□□□□ 0.66
Chd1P40201 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Chd1P40201 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC19.18■□□□□ 0.66
Chd1P40201 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd1P40201 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd1P40201 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Chd1P40201 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Chd1P40201 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd1P40201 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Chd1P40201 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd1P40201 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Chd1P40201 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd1P40201 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd1P40201 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Chd1P40201 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chd1P40201 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chd1P40201 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd1P40201 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC19.17■□□□□ 0.66
Chd1P40201 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd1P40201 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd1P40201 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd1P40201 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd1P40201 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd1P40201 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Chd1P40201 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC19.17■□□□□ 0.66
Chd1P40201 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Chd1P40201 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd1P40201 Gm5989-201ENSMUST00000096092 2077 ntBASIC19.17■□□□□ 0.66
Chd1P40201 Gm22920-201ENSMUST00000102175 109 ntBASIC19.17■□□□□ 0.66
Chd1P40201 Gm13549-201ENSMUST00000118339 796 ntBASIC19.17■□□□□ 0.66
Chd1P40201 Gm13022-201ENSMUST00000121181 285 ntBASIC19.17■□□□□ 0.66
Chd1P40201 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chd1P40201 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC19.17■□□□□ 0.66
Chd1P40201 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Chd1P40201 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Chd1P40201 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Chd1P40201 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Chd1P40201 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Chd1P40201 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Chd1P40201 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Chd1P40201 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd1P40201 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd1P40201 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Chd1P40201 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd1P40201 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Chd1P40201 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1P40201 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1P40201 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1P40201 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC19.16■□□□□ 0.66
Chd1P40201 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1P40201 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1P40201 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1P40201 CT025610.1-201ENSMUST00000224552 1786 ntBASIC19.16■□□□□ 0.66
Chd1P40201 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1P40201 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1P40201 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Chd1P40201 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1P40201 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC19.16■□□□□ 0.66
Chd1P40201 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC19.16■□□□□ 0.66
Chd1P40201 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1P40201 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1P40201 Gm29499-201ENSMUST00000189151 486 ntBASIC19.16■□□□□ 0.66
Chd1P40201 Gm28329-201ENSMUST00000191208 689 ntBASIC19.16■□□□□ 0.66
Chd1P40201 Gm29171-201ENSMUST00000191397 486 ntBASIC19.16■□□□□ 0.66
Chd1P40201 Gm43275-201ENSMUST00000202053 1020 ntBASIC19.16■□□□□ 0.66
Chd1P40201 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1P40201 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Chd1P40201 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1P40201 Gm37859-201ENSMUST00000195529 2173 ntBASIC19.16■□□□□ 0.66
Chd1P40201 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1P40201 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC19.16■□□□□ 0.66
Chd1P40201 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms