Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdh4P39038 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdh4P39038 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdh4P39038 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdh4P39038 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdh4P39038 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cdh4P39038 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cdh4P39038 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.55□□□□□ -0.4
Cdh4P39038 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Gm11618-201ENSMUST00000117946 267 ntBASIC12.55□□□□□ -0.4
Cdh4P39038 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdh4P39038 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cdh4P39038 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Gm29649-201ENSMUST00000185649 419 ntBASIC12.55□□□□□ -0.4
Cdh4P39038 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.55□□□□□ -0.4
Cdh4P39038 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cdh4P39038 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdh4P39038 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.55□□□□□ -0.4
Cdh4P39038 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh4P39038 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Cdh4P39038 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh4P39038 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh4P39038 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh4P39038 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh4P39038 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cdh4P39038 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh4P39038 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdh4P39038 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh4P39038 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh4P39038 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.54□□□□□ -0.4
Cdh4P39038 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh4P39038 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cdh4P39038 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.54□□□□□ -0.4
Cdh4P39038 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh4P39038 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.54□□□□□ -0.4
Cdh4P39038 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.54□□□□□ -0.4
Cdh4P39038 Gm24644-201ENSMUST00000157114 139 ntBASIC12.54□□□□□ -0.4
Cdh4P39038 Gm22331-201ENSMUST00000158066 136 ntBASIC12.54□□□□□ -0.4
Cdh4P39038 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh4P39038 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdh4P39038 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.54□□□□□ -0.4
Cdh4P39038 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdh4P39038 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.54□□□□□ -0.4
Cdh4P39038 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdh4P39038 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh4P39038 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh4P39038 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cdh4P39038 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh4P39038 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh4P39038 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh4P39038 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh4P39038 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.54□□□□□ -0.4
Cdh4P39038 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh4P39038 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.54□□□□□ -0.4
Cdh4P39038 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh4P39038 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh4P39038 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh4P39038 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh4P39038 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh4P39038 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh4P39038 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cdh4P39038 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cdh4P39038 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cdh4P39038 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh4P39038 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdh4P39038 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdh4P39038 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Cdh4P39038 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms