Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Gm11478-201ENSMUST00000117851 599 ntBASIC12.91□□□□□ -0.34
HmgclP38060 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.91□□□□□ -0.34
HmgclP38060 Gm27486-201ENSMUST00000184923 80 ntBASIC12.91□□□□□ -0.34
HmgclP38060 Gm37922-201ENSMUST00000195596 455 ntBASIC12.91□□□□□ -0.34
HmgclP38060 Gm5035-201ENSMUST00000215581 927 ntBASIC12.91□□□□□ -0.34
HmgclP38060 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
HmgclP38060 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
HmgclP38060 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.91□□□□□ -0.34
HmgclP38060 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
HmgclP38060 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HmgclP38060 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
HmgclP38060 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
HmgclP38060 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
HmgclP38060 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
HmgclP38060 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HmgclP38060 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.9□□□□□ -0.34
HmgclP38060 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HmgclP38060 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.9□□□□□ -0.34
HmgclP38060 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
HmgclP38060 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HmgclP38060 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HmgclP38060 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
HmgclP38060 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.9□□□□□ -0.34
HmgclP38060 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HmgclP38060 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HmgclP38060 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HmgclP38060 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HmgclP38060 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HmgclP38060 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
HmgclP38060 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
HmgclP38060 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
HmgclP38060 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.9□□□□□ -0.34
HmgclP38060 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.9□□□□□ -0.34
HmgclP38060 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HmgclP38060 Gm13123-201ENSMUST00000122173 492 ntBASIC12.9□□□□□ -0.34
HmgclP38060 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.9□□□□□ -0.34
HmgclP38060 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HmgclP38060 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HmgclP38060 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HmgclP38060 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
HmgclP38060 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
HmgclP38060 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
HmgclP38060 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HmgclP38060 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HmgclP38060 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
HmgclP38060 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HmgclP38060 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.9□□□□□ -0.34
HmgclP38060 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.9□□□□□ -0.34
HmgclP38060 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HmgclP38060 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HmgclP38060 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HmgclP38060 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
HmgclP38060 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.9□□□□□ -0.35
HmgclP38060 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HmgclP38060 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.89□□□□□ -0.35
HmgclP38060 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HmgclP38060 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
HmgclP38060 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.89□□□□□ -0.35
HmgclP38060 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
HmgclP38060 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HmgclP38060 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HmgclP38060 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HmgclP38060 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HmgclP38060 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HmgclP38060 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.89□□□□□ -0.35
HmgclP38060 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HmgclP38060 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.89□□□□□ -0.35
HmgclP38060 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.89□□□□□ -0.35
HmgclP38060 Gm37497-201ENSMUST00000195830 798 ntBASIC12.89□□□□□ -0.35
HmgclP38060 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HmgclP38060 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.89□□□□□ -0.35
HmgclP38060 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.89□□□□□ -0.35
HmgclP38060 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.89□□□□□ -0.35
HmgclP38060 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HmgclP38060 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HmgclP38060 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HmgclP38060 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HmgclP38060 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HmgclP38060 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
HmgclP38060 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 241.6 ms