Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.28□□□□□ -0.6
Slc6a1P31648 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.28□□□□□ -0.6
Slc6a1P31648 Mir7221-201ENSMUST00000184009 72 ntBASIC11.28□□□□□ -0.6
Slc6a1P31648 Gm7063-201ENSMUST00000186840 981 ntBASIC11.28□□□□□ -0.6
Slc6a1P31648 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a1P31648 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.28□□□□□ -0.6
Slc6a1P31648 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.28□□□□□ -0.6
Slc6a1P31648 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a1P31648 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a1P31648 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a1P31648 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a1P31648 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a1P31648 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Slc6a1P31648 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Slc6a1P31648 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Slc6a1P31648 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a1P31648 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Slc6a1P31648 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.28□□□□□ -0.6
Slc6a1P31648 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a1P31648 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a1P31648 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a1P31648 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a1P31648 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Slc6a1P31648 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a1P31648 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Slc6a1P31648 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a1P31648 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Slc6a1P31648 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Slc6a1P31648 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Slc6a1P31648 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.27□□□□□ -0.6
Slc6a1P31648 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Slc6a1P31648 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Slc6a1P31648 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Slc6a1P31648 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
Slc6a1P31648 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.27□□□□□ -0.6
Slc6a1P31648 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Slc6a1P31648 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc6a1P31648 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Slc6a1P31648 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Slc6a1P31648 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc6a1P31648 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Slc6a1P31648 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Slc6a1P31648 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Slc6a1P31648 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.27□□□□□ -0.61
Slc6a1P31648 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.27□□□□□ -0.61
Slc6a1P31648 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.27□□□□□ -0.61
Slc6a1P31648 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Slc6a1P31648 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc6a1P31648 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc6a1P31648 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Slc6a1P31648 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc6a1P31648 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.27□□□□□ -0.61
Slc6a1P31648 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc6a1P31648 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc6a1P31648 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc6a1P31648 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc6a1P31648 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc6a1P31648 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.27□□□□□ -0.61
Slc6a1P31648 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc6a1P31648 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc6a1P31648 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Slc6a1P31648 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc6a1P31648 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc6a1P31648 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc6a1P31648 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.26□□□□□ -0.61
Slc6a1P31648 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.26□□□□□ -0.61
Slc6a1P31648 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Slc6a1P31648 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Slc6a1P31648 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc6a1P31648 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Slc6a1P31648 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc6a1P31648 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Slc6a1P31648 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.26□□□□□ -0.61
Slc6a1P31648 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc6a1P31648 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.26□□□□□ -0.61
Slc6a1P31648 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc6a1P31648 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Slc6a1P31648 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc6a1P31648 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc6a1P31648 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Slc6a1P31648 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.26□□□□□ -0.61
Slc6a1P31648 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc6a1P31648 Gm8410-201ENSMUST00000117225 605 ntBASIC11.26□□□□□ -0.61
Slc6a1P31648 Gm6415-201ENSMUST00000118488 348 ntBASIC11.26□□□□□ -0.61
Slc6a1P31648 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.26□□□□□ -0.61
Slc6a1P31648 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.26□□□□□ -0.61
Slc6a1P31648 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Slc6a1P31648 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc6a1P31648 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.26□□□□□ -0.61
Slc6a1P31648 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.26□□□□□ -0.61
Slc6a1P31648 Gm27622-201ENSMUST00000183779 60 ntBASIC11.26□□□□□ -0.61
Slc6a1P31648 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.26□□□□□ -0.61
Slc6a1P31648 Gm5779-201ENSMUST00000218467 910 ntBASIC11.26□□□□□ -0.61
Slc6a1P31648 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc6a1P31648 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Slc6a1P31648 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Slc6a1P31648 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc6a1P31648 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc6a1P31648 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc6a1P31648 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms