Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.07□□□□□ -0.48
Nedd8P29595 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nedd8P29595 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nedd8P29595 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nedd8P29595 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nedd8P29595 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
Nedd8P29595 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nedd8P29595 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nedd8P29595 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.07□□□□□ -0.48
Nedd8P29595 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nedd8P29595 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nedd8P29595 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nedd8P29595 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.07□□□□□ -0.48
Nedd8P29595 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Nedd8P29595 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nedd8P29595 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nedd8P29595 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nedd8P29595 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nedd8P29595 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.07□□□□□ -0.48
Nedd8P29595 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nedd8P29595 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.07□□□□□ -0.48
Nedd8P29595 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nedd8P29595 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nedd8P29595 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nedd8P29595 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nedd8P29595 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nedd8P29595 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.07□□□□□ -0.48
Nedd8P29595 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.06□□□□□ -0.48
Nedd8P29595 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nedd8P29595 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nedd8P29595 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nedd8P29595 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nedd8P29595 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nedd8P29595 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nedd8P29595 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nedd8P29595 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Nedd8P29595 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nedd8P29595 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nedd8P29595 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Nedd8P29595 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.06□□□□□ -0.48
Nedd8P29595 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.06□□□□□ -0.48
Nedd8P29595 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.06□□□□□ -0.48
Nedd8P29595 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nedd8P29595 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nedd8P29595 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nedd8P29595 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nedd8P29595 Gm27628-201ENSMUST00000184911 107 ntBASIC12.06□□□□□ -0.48
Nedd8P29595 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nedd8P29595 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.06□□□□□ -0.48
Nedd8P29595 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nedd8P29595 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nedd8P29595 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.06□□□□□ -0.48
Nedd8P29595 Mir125a-201ENSMUST00000083545 68 ntBASIC12.06□□□□□ -0.48
Nedd8P29595 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nedd8P29595 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nedd8P29595 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nedd8P29595 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nedd8P29595 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.06□□□□□ -0.48
Nedd8P29595 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.06□□□□□ -0.48
Nedd8P29595 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Nedd8P29595 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Nedd8P29595 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nedd8P29595 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nedd8P29595 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nedd8P29595 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nedd8P29595 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.06□□□□□ -0.48
Nedd8P29595 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.06□□□□□ -0.48
Nedd8P29595 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nedd8P29595 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nedd8P29595 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nedd8P29595 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.06□□□□□ -0.48
Nedd8P29595 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.06□□□□□ -0.48
Nedd8P29595 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.05□□□□□ -0.48
Nedd8P29595 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Nedd8P29595 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Nedd8P29595 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.05□□□□□ -0.48
Nedd8P29595 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Nedd8P29595 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.05□□□□□ -0.48
Nedd8P29595 Gm7862-201ENSMUST00000121461 292 ntBASIC12.05□□□□□ -0.48
Nedd8P29595 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Nedd8P29595 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.05□□□□□ -0.48
Nedd8P29595 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.05□□□□□ -0.48
Nedd8P29595 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 Gm15590-201ENSMUST00000078419 552 ntBASIC12.05□□□□□ -0.48
Nedd8P29595 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nedd8P29595 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms