Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Vcam1P29533 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vcam1P29533 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.99□□□□□ -0.01
Vcam1P29533 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.99□□□□□ -0.01
Vcam1P29533 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vcam1P29533 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vcam1P29533 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vcam1P29533 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vcam1P29533 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vcam1P29533 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vcam1P29533 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Vcam1P29533 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vcam1P29533 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.99□□□□□ -0.01
Vcam1P29533 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.98□□□□□ -0.01
Vcam1P29533 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vcam1P29533 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcam1P29533 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcam1P29533 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcam1P29533 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcam1P29533 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcam1P29533 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcam1P29533 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcam1P29533 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.98□□□□□ -0.01
Vcam1P29533 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vcam1P29533 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcam1P29533 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.98□□□□□ -0.01
Vcam1P29533 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Vcam1P29533 Gm14921-201ENSMUST00000118643 908 ntBASIC14.98□□□□□ -0.01
Vcam1P29533 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.98□□□□□ -0.01
Vcam1P29533 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Vcam1P29533 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.98□□□□□ -0.01
Vcam1P29533 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.98□□□□□ -0.01
Vcam1P29533 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Vcam1P29533 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vcam1P29533 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Vcam1P29533 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Vcam1P29533 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Vcam1P29533 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.98□□□□□ -0.01
Vcam1P29533 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcam1P29533 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcam1P29533 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcam1P29533 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcam1P29533 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Vcam1P29533 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Vcam1P29533 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcam1P29533 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vcam1P29533 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Vcam1P29533 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vcam1P29533 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcam1P29533 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Vcam1P29533 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcam1P29533 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vcam1P29533 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vcam1P29533 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcam1P29533 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.98□□□□□ -0.01
Vcam1P29533 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vcam1P29533 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcam1P29533 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Vcam1P29533 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.97□□□□□ -0.01
Vcam1P29533 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.97□□□□□ -0.01
Vcam1P29533 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcam1P29533 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcam1P29533 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcam1P29533 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcam1P29533 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.97□□□□□ -0.01
Vcam1P29533 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Vcam1P29533 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcam1P29533 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcam1P29533 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Vcam1P29533 Gm12997-201ENSMUST00000120207 640 ntBASIC14.97□□□□□ -0.01
Vcam1P29533 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vcam1P29533 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Vcam1P29533 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.97□□□□□ -0.01
Vcam1P29533 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.97□□□□□ -0.01
Vcam1P29533 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.97□□□□□ -0.01
Vcam1P29533 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.97□□□□□ -0.01
Vcam1P29533 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vcam1P29533 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.97□□□□□ -0.01
Vcam1P29533 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcam1P29533 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vcam1P29533 Mir433-201ENSMUST00000093564 124 ntBASIC14.97□□□□□ -0.01
Vcam1P29533 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.97□□□□□ -0.01
Vcam1P29533 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.97□□□□□ -0.01
Vcam1P29533 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcam1P29533 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcam1P29533 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vcam1P29533 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcam1P29533 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Vcam1P29533 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.97□□□□□ -0.01
Vcam1P29533 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcam1P29533 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Vcam1P29533 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vcam1P29533 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Vcam1P29533 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcam1P29533 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Vcam1P29533 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
Vcam1P29533 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.96□□□□□ -0.01
Vcam1P29533 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcam1P29533 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcam1P29533 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms