Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.22□□□□□ -0.77
Ccl6P27784 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl6P27784 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl6P27784 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl6P27784 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl6P27784 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Ccl6P27784 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
Ccl6P27784 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl6P27784 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl6P27784 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl6P27784 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ccl6P27784 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Ccl6P27784 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl6P27784 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Ccl6P27784 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.21□□□□□ -0.77
Ccl6P27784 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl6P27784 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl6P27784 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl6P27784 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl6P27784 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl6P27784 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Ccl6P27784 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl6P27784 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl6P27784 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl6P27784 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl6P27784 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl6P27784 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl6P27784 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl6P27784 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl6P27784 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Ccl6P27784 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl6P27784 Gm14928-201ENSMUST00000120198 477 ntBASIC10.21□□□□□ -0.77
Ccl6P27784 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC10.21□□□□□ -0.77
Ccl6P27784 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC10.21□□□□□ -0.77
Ccl6P27784 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl6P27784 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl6P27784 Gm23984-201ENSMUST00000157139 203 ntBASIC10.21□□□□□ -0.77
Ccl6P27784 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.21□□□□□ -0.77
Ccl6P27784 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Ccl6P27784 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC10.21□□□□□ -0.77
Ccl6P27784 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.21□□□□□ -0.77
Ccl6P27784 Gm38223-201ENSMUST00000194484 695 ntBASIC10.21□□□□□ -0.77
Ccl6P27784 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Ccl6P27784 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl6P27784 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl6P27784 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.21□□□□□ -0.77
Ccl6P27784 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.21□□□□□ -0.77
Ccl6P27784 Gm26315-201ENSMUST00000083890 321 ntBASIC10.21□□□□□ -0.77
Ccl6P27784 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl6P27784 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Ccl6P27784 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl6P27784 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.21□□□□□ -0.78
Ccl6P27784 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl6P27784 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl6P27784 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl6P27784 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl6P27784 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl6P27784 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.21□□□□□ -0.78
Ccl6P27784 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl6P27784 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl6P27784 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl6P27784 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.21□□□□□ -0.78
Ccl6P27784 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl6P27784 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.21□□□□□ -0.78
Ccl6P27784 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl6P27784 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl6P27784 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.21□□□□□ -0.78
Ccl6P27784 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.21□□□□□ -0.78
Ccl6P27784 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl6P27784 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl6P27784 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl6P27784 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl6P27784 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Ccl6P27784 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl6P27784 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.2□□□□□ -0.78
Ccl6P27784 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl6P27784 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl6P27784 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Ccl6P27784 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl6P27784 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl6P27784 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl6P27784 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl6P27784 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl6P27784 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl6P27784 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl6P27784 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Ccl6P27784 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl6P27784 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.2□□□□□ -0.78
Ccl6P27784 Gm5303-201ENSMUST00000117943 1252 ntBASIC10.2□□□□□ -0.78
Ccl6P27784 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
Ccl6P27784 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC10.2□□□□□ -0.78
Ccl6P27784 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.2□□□□□ -0.78
Ccl6P27784 Gm12091-201ENSMUST00000146791 830 ntBASIC10.2□□□□□ -0.78
Ccl6P27784 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl6P27784 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl6P27784 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Ccl6P27784 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl6P27784 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl6P27784 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl6P27784 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms