Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40P27512 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cd40P27512 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cd40P27512 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Gm11637-201ENSMUST00000120601 592 ntBASIC11.84□□□□□ -0.51
Cd40P27512 Gm2231-201ENSMUST00000125661 612 ntBASIC11.84□□□□□ -0.51
Cd40P27512 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.84□□□□□ -0.51
Cd40P27512 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.84□□□□□ -0.51
Cd40P27512 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.84□□□□□ -0.51
Cd40P27512 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.84□□□□□ -0.51
Cd40P27512 Gm29649-201ENSMUST00000185649 419 ntBASIC11.84□□□□□ -0.51
Cd40P27512 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.84□□□□□ -0.51
Cd40P27512 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cd40P27512 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.84□□□□□ -0.51
Cd40P27512 Gm7561-201ENSMUST00000211203 886 ntBASIC11.84□□□□□ -0.51
Cd40P27512 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.84□□□□□ -0.51
Cd40P27512 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Gm6091-201ENSMUST00000098307 165 ntBASIC11.84□□□□□ -0.51
Cd40P27512 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cd40P27512 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cd40P27512 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cd40P27512 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Cd40P27512 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40P27512 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Cd40P27512 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd40P27512 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd40P27512 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Cd40P27512 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.83□□□□□ -0.52
Cd40P27512 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd40P27512 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd40P27512 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cd40P27512 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd40P27512 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cd40P27512 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd40P27512 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd40P27512 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd40P27512 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd40P27512 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cd40P27512 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd40P27512 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.83□□□□□ -0.52
Cd40P27512 Gm4984-201ENSMUST00000115987 360 ntBASIC11.83□□□□□ -0.52
Cd40P27512 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.83□□□□□ -0.52
Cd40P27512 Gm4271-201ENSMUST00000174444 973 ntBASIC11.83□□□□□ -0.52
Cd40P27512 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd40P27512 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd40P27512 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cd40P27512 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cd40P27512 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.83□□□□□ -0.52
Cd40P27512 Gm27331-201ENSMUST00000183705 60 ntBASIC11.83□□□□□ -0.52
Cd40P27512 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.83□□□□□ -0.52
Cd40P27512 Gm43438-201ENSMUST00000198133 379 ntBASIC11.83□□□□□ -0.52
Cd40P27512 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.83□□□□□ -0.52
Cd40P27512 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
Cd40P27512 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cd40P27512 Gm29705-201ENSMUST00000212598 474 ntBASIC11.83□□□□□ -0.52
Cd40P27512 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cd40P27512 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd40P27512 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd40P27512 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.83□□□□□ -0.52
Cd40P27512 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd40P27512 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cd40P27512 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.83□□□□□ -0.52
Cd40P27512 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd40P27512 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cd40P27512 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Cd40P27512 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd40P27512 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms