Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Tnfrsf1aP25118 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Syt7-205ENSMUST00000224135 1557 ntBASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Gm15371-201ENSMUST00000117057 784 ntBASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Gm29608-201ENSMUST00000190444 463 ntBASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Gm38223-201ENSMUST00000194484 695 ntBASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Gm19931-201ENSMUST00000198920 368 ntBASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Gm7730-201ENSMUST00000212486 454 ntBASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf1aP25118 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Gm44855-201ENSMUST00000205725 362 ntBASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Gm5626-201ENSMUST00000222151 1058 ntBASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf1aP25118 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tnfrsf1aP25118 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 112.9 ms