Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6bP23440 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6bP23440 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6bP23440 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6bP23440 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6bP23440 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Pde6bP23440 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6bP23440 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6bP23440 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6bP23440 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6bP23440 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6bP23440 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.32□□□□□ -0.12
Pde6bP23440 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pde6bP23440 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6bP23440 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6bP23440 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pde6bP23440 Gm8805-201ENSMUST00000117848 313 ntBASIC14.32□□□□□ -0.12
Pde6bP23440 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.32□□□□□ -0.12
Pde6bP23440 Gm11793-201ENSMUST00000120433 981 ntBASIC14.32□□□□□ -0.12
Pde6bP23440 Gm13342-201ENSMUST00000121055 207 ntBASIC14.32□□□□□ -0.12
Pde6bP23440 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.32□□□□□ -0.12
Pde6bP23440 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.32□□□□□ -0.12
Pde6bP23440 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6bP23440 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6bP23440 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6bP23440 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.32□□□□□ -0.12
Pde6bP23440 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Pde6bP23440 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6bP23440 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6bP23440 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6bP23440 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6bP23440 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6bP23440 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Pde6bP23440 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6bP23440 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6bP23440 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6bP23440 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6bP23440 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.31□□□□□ -0.12
Pde6bP23440 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6bP23440 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6bP23440 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6bP23440 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.31□□□□□ -0.12
Pde6bP23440 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6bP23440 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6bP23440 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6bP23440 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6bP23440 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Pde6bP23440 Gm13350-201ENSMUST00000120519 479 ntBASIC14.31□□□□□ -0.12
Pde6bP23440 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.31□□□□□ -0.12
Pde6bP23440 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6bP23440 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6bP23440 Gm27243-201ENSMUST00000183964 521 ntBASIC14.31□□□□□ -0.12
Pde6bP23440 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.31□□□□□ -0.12
Pde6bP23440 Gm7783-201ENSMUST00000204795 781 ntBASIC14.31□□□□□ -0.12
Pde6bP23440 Gm9368-201ENSMUST00000219348 831 ntBASIC14.31□□□□□ -0.12
Pde6bP23440 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.31□□□□□ -0.12
Pde6bP23440 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pde6bP23440 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pde6bP23440 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pde6bP23440 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6bP23440 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.31□□□□□ -0.12
Pde6bP23440 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6bP23440 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6bP23440 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.31□□□□□ -0.12
Pde6bP23440 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6bP23440 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6bP23440 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6bP23440 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6bP23440 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6bP23440 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6bP23440 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6bP23440 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6bP23440 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6bP23440 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pde6bP23440 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6bP23440 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Pde6bP23440 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6bP23440 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6bP23440 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6bP23440 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6bP23440 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.3□□□□□ -0.12
Pde6bP23440 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pde6bP23440 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6bP23440 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6bP23440 Gm6447-201ENSMUST00000118905 835 ntBASIC14.3□□□□□ -0.12
Pde6bP23440 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6bP23440 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.3□□□□□ -0.12
Pde6bP23440 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6bP23440 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6bP23440 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6bP23440 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pde6bP23440 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6bP23440 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6bP23440 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.3□□□□□ -0.12
Pde6bP23440 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6bP23440 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6bP23440 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6bP23440 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6bP23440 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6bP23440 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms