Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TP20293 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TP20293 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
TP20293 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.35□□□□□ -0.43
TP20293 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.35□□□□□ -0.43
TP20293 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.35□□□□□ -0.43
TP20293 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.35□□□□□ -0.43
TP20293 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.35□□□□□ -0.43
TP20293 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.35□□□□□ -0.43
TP20293 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Gm28911-201ENSMUST00000188837 117 ntBASIC12.35□□□□□ -0.43
TP20293 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.35□□□□□ -0.43
TP20293 Gm2495-201ENSMUST00000191160 466 ntBASIC12.35□□□□□ -0.43
TP20293 Gm6745-201ENSMUST00000199216 526 ntBASIC12.35□□□□□ -0.43
TP20293 Gm9794-201ENSMUST00000202370 423 ntBASIC12.35□□□□□ -0.43
TP20293 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.35□□□□□ -0.43
TP20293 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.35□□□□□ -0.43
TP20293 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.35□□□□□ -0.43
TP20293 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.35□□□□□ -0.43
TP20293 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.35□□□□□ -0.43
TP20293 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.35□□□□□ -0.43
TP20293 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
TP20293 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
TP20293 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
TP20293 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.35□□□□□ -0.43
TP20293 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.35□□□□□ -0.43
TP20293 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TP20293 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TP20293 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
TP20293 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TP20293 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TP20293 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TP20293 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TP20293 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TP20293 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TP20293 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TP20293 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TP20293 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TP20293 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TP20293 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
TP20293 Gm45384-201ENSMUST00000210451 277 ntBASIC12.34□□□□□ -0.43
TP20293 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.34□□□□□ -0.43
TP20293 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TP20293 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
TP20293 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TP20293 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TP20293 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
TP20293 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TP20293 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
TP20293 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TP20293 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TP20293 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.34□□□□□ -0.43
TP20293 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TP20293 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TP20293 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TP20293 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TP20293 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TP20293 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TP20293 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TP20293 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TP20293 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TP20293 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TP20293 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TP20293 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TP20293 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TP20293 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
TP20293 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
TP20293 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TP20293 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TP20293 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms