Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx1P13297 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx1P13297 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx1P13297 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Msx1P13297 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Msx1P13297 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msx1P13297 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx1P13297 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx1P13297 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msx1P13297 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.54□□□□□ -0.4
Msx1P13297 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Msx1P13297 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.54□□□□□ -0.4
Msx1P13297 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.54□□□□□ -0.4
Msx1P13297 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.54□□□□□ -0.4
Msx1P13297 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx1P13297 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.53□□□□□ -0.4
Msx1P13297 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.53□□□□□ -0.4
Msx1P13297 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.53□□□□□ -0.4
Msx1P13297 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Msx1P13297 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.53□□□□□ -0.4
Msx1P13297 Gm43980-201ENSMUST00000204899 1612 ntBASIC12.53□□□□□ -0.4
Msx1P13297 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.53□□□□□ -0.4
Msx1P13297 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Gm7584-201ENSMUST00000175829 940 ntBASIC12.53□□□□□ -0.4
Msx1P13297 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.53□□□□□ -0.4
Msx1P13297 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Zmym2-202ENSMUST00000223669 1281 ntBASIC12.53□□□□□ -0.4
Msx1P13297 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Msx1P13297 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Msx1P13297 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Msx1P13297 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx1P13297 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Msx1P13297 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Msx1P13297 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Msx1P13297 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Msx1P13297 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Msx1P13297 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Msx1P13297 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Msx1P13297 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Msx1P13297 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Msx1P13297 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Msx1P13297 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Msx1P13297 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Msx1P13297 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Msx1P13297 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.52□□□□□ -0.41
Msx1P13297 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Msx1P13297 Gm37466-201ENSMUST00000195692 652 ntBASIC12.52□□□□□ -0.41
Msx1P13297 Gm43222-201ENSMUST00000199013 603 ntBASIC12.52□□□□□ -0.41
Msx1P13297 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.52□□□□□ -0.41
Msx1P13297 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Msx1P13297 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Msx1P13297 Gm19309-201ENSMUST00000218295 205 ntBASIC12.52□□□□□ -0.41
Msx1P13297 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.52□□□□□ -0.41
Msx1P13297 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Msx1P13297 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Msx1P13297 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Msx1P13297 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Msx1P13297 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.52□□□□□ -0.41
Msx1P13297 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Msx1P13297 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Msx1P13297 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Msx1P13297 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Msx1P13297 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms