Protein–RNA interactions for Protein: P04202

Tgfb1, Transforming growth factor beta-1, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1P04202 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tgfb1P04202 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tgfb1P04202 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.12□□□□□ -0.47
Tgfb1P04202 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tgfb1P04202 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tgfb1P04202 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Tgfb1P04202 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tgfb1P04202 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tgfb1P04202 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tgfb1P04202 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tgfb1P04202 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.12□□□□□ -0.47
Tgfb1P04202 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tgfb1P04202 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.12□□□□□ -0.47
Tgfb1P04202 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.12□□□□□ -0.47
Tgfb1P04202 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.12□□□□□ -0.47
Tgfb1P04202 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.12□□□□□ -0.47
Tgfb1P04202 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.12□□□□□ -0.47
Tgfb1P04202 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.12□□□□□ -0.47
Tgfb1P04202 Gm8463-201ENSMUST00000208573 613 ntBASIC12.12□□□□□ -0.47
Tgfb1P04202 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.12□□□□□ -0.47
Tgfb1P04202 Itm2b-204ENSMUST00000228637 783 ntBASIC12.12□□□□□ -0.47
Tgfb1P04202 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.12□□□□□ -0.47
Tgfb1P04202 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tgfb1P04202 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tgfb1P04202 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Tgfb1P04202 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tgfb1P04202 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tgfb1P04202 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tgfb1P04202 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tgfb1P04202 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tgfb1P04202 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tgfb1P04202 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tgfb1P04202 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Tgfb1P04202 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.11□□□□□ -0.47
Tgfb1P04202 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Tgfb1P04202 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Tgfb1P04202 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tgfb1P04202 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.11□□□□□ -0.47
Tgfb1P04202 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tgfb1P04202 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tgfb1P04202 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tgfb1P04202 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tgfb1P04202 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tgfb1P04202 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.11□□□□□ -0.47
Tgfb1P04202 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.11□□□□□ -0.47
Tgfb1P04202 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.11□□□□□ -0.47
Tgfb1P04202 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tgfb1P04202 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tgfb1P04202 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tgfb1P04202 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tgfb1P04202 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.11□□□□□ -0.47
Tgfb1P04202 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.11□□□□□ -0.47
Tgfb1P04202 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.11□□□□□ -0.47
Tgfb1P04202 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.11□□□□□ -0.47
Tgfb1P04202 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tgfb1P04202 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.11□□□□□ -0.47
Tgfb1P04202 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.11□□□□□ -0.47
Tgfb1P04202 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.11□□□□□ -0.47
Tgfb1P04202 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.11□□□□□ -0.47
Tgfb1P04202 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Tgfb1P04202 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tgfb1P04202 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tgfb1P04202 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tgfb1P04202 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tgfb1P04202 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tgfb1P04202 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tgfb1P04202 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tgfb1P04202 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tgfb1P04202 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tgfb1P04202 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tgfb1P04202 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tgfb1P04202 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tgfb1P04202 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tgfb1P04202 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tgfb1P04202 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Tgfb1P04202 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tgfb1P04202 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tgfb1P04202 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tgfb1P04202 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tgfb1P04202 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tgfb1P04202 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tgfb1P04202 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tgfb1P04202 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tgfb1P04202 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.1□□□□□ -0.47
Tgfb1P04202 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tgfb1P04202 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Tgfb1P04202 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.1□□□□□ -0.47
Tgfb1P04202 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.1□□□□□ -0.47
Tgfb1P04202 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.1□□□□□ -0.47
Tgfb1P04202 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tgfb1P04202 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tgfb1P04202 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Tgfb1P04202 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.1□□□□□ -0.47
Tgfb1P04202 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Tgfb1P04202 Gm21156-201ENSMUST00000189693 869 ntBASIC12.1□□□□□ -0.47
Tgfb1P04202 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.1□□□□□ -0.47
Tgfb1P04202 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.1□□□□□ -0.47
Tgfb1P04202 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.1□□□□□ -0.47
Tgfb1P04202 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tgfb1P04202 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms