Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12□□□□□ -0.49
P01852 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
P01852 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
P01852 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
P01852 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P01852 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12□□□□□ -0.49
P01852 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.99□□□□□ -0.49
P01852 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
P01852 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Gm10156-201ENSMUST00000122364 462 ntBASIC11.99□□□□□ -0.49
P01852 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.99□□□□□ -0.49
P01852 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.99□□□□□ -0.49
P01852 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.99□□□□□ -0.49
P01852 Proscos-202ENSMUST00000178990 666 ntBASIC11.99□□□□□ -0.49
P01852 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
P01852 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.99□□□□□ -0.49
P01852 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.99□□□□□ -0.49
P01852 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.99□□□□□ -0.49
P01852 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.99□□□□□ -0.49
P01852 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.99□□□□□ -0.49
P01852 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
P01852 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.99□□□□□ -0.49
P01852 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
P01852 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
P01852 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
P01852 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
P01852 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P01852 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
P01852 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P01852 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.98□□□□□ -0.49
P01852 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P01852 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
P01852 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
P01852 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
P01852 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P01852 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P01852 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.98□□□□□ -0.49
P01852 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P01852 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P01852 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P01852 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P01852 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P01852 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
P01852 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P01852 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.98□□□□□ -0.49
P01852 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P01852 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P01852 Gm6447-201ENSMUST00000118905 835 ntBASIC11.98□□□□□ -0.49
P01852 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P01852 Gm11803-201ENSMUST00000119966 444 ntBASIC11.98□□□□□ -0.49
P01852 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
P01852 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P01852 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.98□□□□□ -0.49
P01852 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.98□□□□□ -0.49
P01852 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.98□□□□□ -0.49
P01852 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.98□□□□□ -0.49
P01852 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P01852 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P01852 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
P01852 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
P01852 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P01852 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.98□□□□□ -0.49
P01852 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P01852 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P01852 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.98□□□□□ -0.49
P01852 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P01852 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
P01852 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
P01852 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
P01852 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms