Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Matn4O89029 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn4O89029 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn4O89029 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Matn4O89029 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Matn4O89029 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Matn4O89029 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn4O89029 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn4O89029 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn4O89029 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Matn4O89029 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.37□□□□□ -0.43
Matn4O89029 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn4O89029 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Matn4O89029 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.37□□□□□ -0.43
Matn4O89029 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.37□□□□□ -0.43
Matn4O89029 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn4O89029 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Matn4O89029 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn4O89029 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Matn4O89029 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.36□□□□□ -0.43
Matn4O89029 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Matn4O89029 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn4O89029 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn4O89029 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.36□□□□□ -0.43
Matn4O89029 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn4O89029 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn4O89029 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Matn4O89029 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn4O89029 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn4O89029 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn4O89029 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.36□□□□□ -0.43
Matn4O89029 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
Matn4O89029 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Matn4O89029 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.36□□□□□ -0.43
Matn4O89029 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.36□□□□□ -0.43
Matn4O89029 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn4O89029 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn4O89029 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.36□□□□□ -0.43
Matn4O89029 Gm43575-201ENSMUST00000196420 516 ntBASIC12.36□□□□□ -0.43
Matn4O89029 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.36□□□□□ -0.43
Matn4O89029 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.36□□□□□ -0.43
Matn4O89029 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Matn4O89029 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.36□□□□□ -0.43
Matn4O89029 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn4O89029 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn4O89029 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn4O89029 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn4O89029 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn4O89029 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn4O89029 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn4O89029 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Matn4O89029 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.36□□□□□ -0.43
Matn4O89029 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.36□□□□□ -0.43
Matn4O89029 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn4O89029 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn4O89029 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn4O89029 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Matn4O89029 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.35□□□□□ -0.43
Matn4O89029 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Matn4O89029 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Matn4O89029 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Matn4O89029 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Matn4O89029 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Matn4O89029 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.35□□□□□ -0.43
Matn4O89029 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.35□□□□□ -0.43
Matn4O89029 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Matn4O89029 Gm11978-201ENSMUST00000122315 466 ntBASIC12.35□□□□□ -0.43
Matn4O89029 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Matn4O89029 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.35□□□□□ -0.43
Matn4O89029 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Matn4O89029 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Matn4O89029 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Matn4O89029 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Matn4O89029 Gm42550-201ENSMUST00000201553 960 ntBASIC12.35□□□□□ -0.43
Matn4O89029 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Matn4O89029 Gm9797-201ENSMUST00000052902 613 ntBASIC12.35□□□□□ -0.43
Matn4O89029 Gm20445-201ENSMUST00000061905 565 ntBASIC12.35□□□□□ -0.43
Matn4O89029 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Matn4O89029 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Matn4O89029 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Matn4O89029 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Matn4O89029 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.35□□□□□ -0.43
Matn4O89029 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Matn4O89029 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Matn4O89029 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Matn4O89029 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Matn4O89029 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Matn4O89029 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.35□□□□□ -0.43
Matn4O89029 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.35□□□□□ -0.43
Matn4O89029 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Matn4O89029 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Matn4O89029 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.34□□□□□ -0.43
Matn4O89029 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.34□□□□□ -0.43
Matn4O89029 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.34□□□□□ -0.43
Matn4O89029 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Matn4O89029 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Matn4O89029 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.34□□□□□ -0.43
Matn4O89029 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Matn4O89029 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Matn4O89029 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms