Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.1□□□□□ -0.47
Cops4O88544 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.1□□□□□ -0.47
Cops4O88544 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.1□□□□□ -0.47
Cops4O88544 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.1□□□□□ -0.47
Cops4O88544 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cops4O88544 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.1□□□□□ -0.47
Cops4O88544 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cops4O88544 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.09□□□□□ -0.47
Cops4O88544 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Cops4O88544 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
Cops4O88544 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.09□□□□□ -0.47
Cops4O88544 Gm12428-201ENSMUST00000119844 727 ntBASIC12.09□□□□□ -0.47
Cops4O88544 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.09□□□□□ -0.47
Cops4O88544 Gm25948-201ENSMUST00000175334 112 ntBASIC12.09□□□□□ -0.47
Cops4O88544 Gm27533-201ENSMUST00000183800 152 ntBASIC12.09□□□□□ -0.47
Cops4O88544 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.09□□□□□ -0.47
Cops4O88544 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.09□□□□□ -0.47
Cops4O88544 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.09□□□□□ -0.47
Cops4O88544 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.09□□□□□ -0.47
Cops4O88544 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cops4O88544 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.09□□□□□ -0.47
Cops4O88544 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.09□□□□□ -0.47
Cops4O88544 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cops4O88544 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.08□□□□□ -0.47
Cops4O88544 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.47
Cops4O88544 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cops4O88544 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.08□□□□□ -0.48
Cops4O88544 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.08□□□□□ -0.48
Cops4O88544 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Cops4O88544 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Cops4O88544 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cops4O88544 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cops4O88544 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Gm23935-201ENSMUST00000102303 57 ntBASIC12.08□□□□□ -0.48
Cops4O88544 Gm24270-201ENSMUST00000102326 57 ntBASIC12.08□□□□□ -0.48
Cops4O88544 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Cops4O88544 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.08□□□□□ -0.48
Cops4O88544 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Cops4O88544 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Gm24245-201ENSMUST00000157318 57 ntBASIC12.08□□□□□ -0.48
Cops4O88544 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.08□□□□□ -0.48
Cops4O88544 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.08□□□□□ -0.48
Cops4O88544 Gm21470-201ENSMUST00000187680 696 ntBASIC12.08□□□□□ -0.48
Cops4O88544 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.08□□□□□ -0.48
Cops4O88544 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cops4O88544 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms