Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Itgb3O54890 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Itgb3O54890 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Itgb3O54890 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.87□□□□□ -0.19
Itgb3O54890 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Itgb3O54890 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Itgb3O54890 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Itgb3O54890 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Itgb3O54890 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Itgb3O54890 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Itgb3O54890 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Itgb3O54890 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Itgb3O54890 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Itgb3O54890 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Itgb3O54890 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Itgb3O54890 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Itgb3O54890 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Itgb3O54890 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Itgb3O54890 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Itgb3O54890 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Itgb3O54890 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.87□□□□□ -0.19
Itgb3O54890 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
Itgb3O54890 Mir1938-201ENSMUST00000158746 100 ntBASIC13.87□□□□□ -0.19
Itgb3O54890 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Itgb3O54890 Gm42693-201ENSMUST00000196779 631 ntBASIC13.87□□□□□ -0.19
Itgb3O54890 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Itgb3O54890 Snora73a-201ENSMUST00000082453 205 ntBASIC13.87□□□□□ -0.19
Itgb3O54890 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.87□□□□□ -0.19
Itgb3O54890 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Itgb3O54890 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Itgb3O54890 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Itgb3O54890 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Itgb3O54890 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Itgb3O54890 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Itgb3O54890 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Itgb3O54890 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Itgb3O54890 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Itgb3O54890 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Itgb3O54890 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.87□□□□□ -0.19
Itgb3O54890 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Itgb3O54890 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Gm22018-201ENSMUST00000104357 131 ntBASIC13.86□□□□□ -0.19
Itgb3O54890 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.86□□□□□ -0.19
Itgb3O54890 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Gm17208-201ENSMUST00000168388 535 ntBASIC13.86□□□□□ -0.19
Itgb3O54890 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.86□□□□□ -0.19
Itgb3O54890 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Gm37042-201ENSMUST00000193816 581 ntBASIC13.86□□□□□ -0.19
Itgb3O54890 Gm37008-201ENSMUST00000195712 319 ntBASIC13.86□□□□□ -0.19
Itgb3O54890 Gm4768-201ENSMUST00000206199 686 ntBASIC13.86□□□□□ -0.19
Itgb3O54890 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Itgb3O54890 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Itgb3O54890 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Itgb3O54890 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Itgb3O54890 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.86□□□□□ -0.19
Itgb3O54890 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Itgb3O54890 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Itgb3O54890 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Itgb3O54890 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Itgb3O54890 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Itgb3O54890 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Itgb3O54890 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Itgb3O54890 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.85□□□□□ -0.19
Itgb3O54890 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Itgb3O54890 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Itgb3O54890 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Itgb3O54890 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Itgb3O54890 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms