Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nr1i3O35627 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1i3O35627 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1i3O35627 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1i3O35627 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.08□□□□□ -0.16
Nr1i3O35627 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.07□□□□□ -0.16
Nr1i3O35627 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1i3O35627 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.07□□□□□ -0.16
Nr1i3O35627 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1i3O35627 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1i3O35627 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.07□□□□□ -0.16
Nr1i3O35627 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1i3O35627 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1i3O35627 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.07□□□□□ -0.16
Nr1i3O35627 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1i3O35627 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1i3O35627 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1i3O35627 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Nr1i3O35627 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1i3O35627 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1i3O35627 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1i3O35627 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.07□□□□□ -0.16
Nr1i3O35627 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1i3O35627 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1i3O35627 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nr1i3O35627 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.07□□□□□ -0.16
Nr1i3O35627 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.07□□□□□ -0.16
Nr1i3O35627 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1i3O35627 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1i3O35627 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1i3O35627 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.07□□□□□ -0.16
Nr1i3O35627 Gm44069-201ENSMUST00000204898 506 ntBASIC14.07□□□□□ -0.16
Nr1i3O35627 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.07□□□□□ -0.16
Nr1i3O35627 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1i3O35627 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1i3O35627 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nr1i3O35627 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1i3O35627 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1i3O35627 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1i3O35627 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.07□□□□□ -0.16
Nr1i3O35627 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nr1i3O35627 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.07□□□□□ -0.16
Nr1i3O35627 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1i3O35627 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1i3O35627 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1i3O35627 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1i3O35627 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1i3O35627 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Nr1i3O35627 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1i3O35627 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1i3O35627 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1i3O35627 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1i3O35627 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nr1i3O35627 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.06□□□□□ -0.16
Nr1i3O35627 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1i3O35627 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1i3O35627 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1i3O35627 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.06□□□□□ -0.16
Nr1i3O35627 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1i3O35627 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1i3O35627 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.06□□□□□ -0.16
Nr1i3O35627 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1i3O35627 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1i3O35627 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1i3O35627 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1i3O35627 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1i3O35627 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.05□□□□□ -0.16
Nr1i3O35627 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1i3O35627 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1i3O35627 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1i3O35627 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1i3O35627 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.05□□□□□ -0.16
Nr1i3O35627 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nr1i3O35627 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.05□□□□□ -0.16
Nr1i3O35627 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1i3O35627 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.05□□□□□ -0.16
Nr1i3O35627 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1i3O35627 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1i3O35627 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.05□□□□□ -0.16
Nr1i3O35627 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1i3O35627 Gm16202-201ENSMUST00000117532 544 ntBASIC14.05□□□□□ -0.16
Nr1i3O35627 Gm15429-201ENSMUST00000151268 798 ntBASIC14.05□□□□□ -0.16
Nr1i3O35627 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Nr1i3O35627 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.05□□□□□ -0.16
Nr1i3O35627 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.05□□□□□ -0.16
Nr1i3O35627 Gm44855-201ENSMUST00000205725 362 ntBASIC14.05□□□□□ -0.16
Nr1i3O35627 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1i3O35627 Gm18473-201ENSMUST00000220543 868 ntBASIC14.05□□□□□ -0.16
Nr1i3O35627 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.05□□□□□ -0.16
Nr1i3O35627 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.05□□□□□ -0.16
Nr1i3O35627 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.05□□□□□ -0.16
Nr1i3O35627 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Nr1i3O35627 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1i3O35627 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1i3O35627 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Nr1i3O35627 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1i3O35627 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1i3O35627 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1i3O35627 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.05□□□□□ -0.16
Nr1i3O35627 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms