Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk2O35491 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Clk2O35491 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk2O35491 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk2O35491 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Clk2O35491 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clk2O35491 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Clk2O35491 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.19□□□□□ -0.14
Clk2O35491 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk2O35491 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk2O35491 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.19□□□□□ -0.14
Clk2O35491 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk2O35491 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk2O35491 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk2O35491 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Clk2O35491 Gm13297-201ENSMUST00000120205 934 ntBASIC14.19□□□□□ -0.14
Clk2O35491 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clk2O35491 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clk2O35491 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.19□□□□□ -0.14
Clk2O35491 Mospd4-201ENSMUST00000180618 576 ntBASIC14.19□□□□□ -0.14
Clk2O35491 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clk2O35491 Gm38266-201ENSMUST00000194931 421 ntBASIC14.19□□□□□ -0.14
Clk2O35491 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.19□□□□□ -0.14
Clk2O35491 Gm10608-202ENSMUST00000213924 676 ntBASIC14.19□□□□□ -0.14
Clk2O35491 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clk2O35491 Gm9368-201ENSMUST00000219348 831 ntBASIC14.19□□□□□ -0.14
Clk2O35491 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk2O35491 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Clk2O35491 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk2O35491 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk2O35491 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk2O35491 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk2O35491 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.19□□□□□ -0.14
Clk2O35491 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk2O35491 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clk2O35491 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.19□□□□□ -0.14
Clk2O35491 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.19□□□□□ -0.14
Clk2O35491 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.19□□□□□ -0.14
Clk2O35491 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk2O35491 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk2O35491 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Clk2O35491 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.19□□□□□ -0.14
Clk2O35491 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk2O35491 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Clk2O35491 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.18□□□□□ -0.14
Clk2O35491 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.18□□□□□ -0.14
Clk2O35491 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.18□□□□□ -0.14
Clk2O35491 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.18□□□□□ -0.14
Clk2O35491 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.18□□□□□ -0.14
Clk2O35491 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Clk2O35491 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.18□□□□□ -0.14
Clk2O35491 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.18□□□□□ -0.14
Clk2O35491 Gm3961-201ENSMUST00000204425 994 ntBASIC14.18□□□□□ -0.14
Clk2O35491 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.18□□□□□ -0.14
Clk2O35491 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Clk2O35491 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Clk2O35491 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Clk2O35491 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Clk2O35491 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk2O35491 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Clk2O35491 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Clk2O35491 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk2O35491 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk2O35491 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk2O35491 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk2O35491 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk2O35491 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk2O35491 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk2O35491 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk2O35491 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.17□□□□□ -0.14
Clk2O35491 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk2O35491 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk2O35491 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk2O35491 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms