Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Alx4O35137 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.7□□□□□ -0.54
Alx4O35137 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.7□□□□□ -0.54
Alx4O35137 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Alx4O35137 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.7□□□□□ -0.54
Alx4O35137 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.7□□□□□ -0.54
Alx4O35137 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Gm4875-201ENSMUST00000118257 786 ntBASIC11.7□□□□□ -0.54
Alx4O35137 Gm13453-201ENSMUST00000118708 357 ntBASIC11.7□□□□□ -0.54
Alx4O35137 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.7□□□□□ -0.54
Alx4O35137 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.7□□□□□ -0.54
Alx4O35137 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Alx4O35137 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Gm43094-201ENSMUST00000196549 921 ntBASIC11.7□□□□□ -0.54
Alx4O35137 Gm7775-201ENSMUST00000218871 853 ntBASIC11.7□□□□□ -0.54
Alx4O35137 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Alx4O35137 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Alx4O35137 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Alx4O35137 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.7□□□□□ -0.54
Alx4O35137 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx4O35137 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.7□□□□□ -0.54
Alx4O35137 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Alx4O35137 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.69□□□□□ -0.54
Alx4O35137 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.69□□□□□ -0.54
Alx4O35137 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Alx4O35137 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.69□□□□□ -0.54
Alx4O35137 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.69□□□□□ -0.54
Alx4O35137 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.69□□□□□ -0.54
Alx4O35137 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Alx4O35137 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx4O35137 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx4O35137 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms