Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Gm5264-201ENSMUST00000190584 848 ntBASIC13.44□□□□□ -0.26
Trim55G3X8Y1 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.44□□□□□ -0.26
Trim55G3X8Y1 AV026068-213ENSMUST00000223675 1171 ntBASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim55G3X8Y1 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Gm43860-201ENSMUST00000201742 2705 ntBASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Gm18262-201ENSMUST00000222560 1946 ntBASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Gm11594-201ENSMUST00000122313 162 ntBASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Gm2213-201ENSMUST00000197485 688 ntBASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Gm15590-201ENSMUST00000078419 552 ntBASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trim55G3X8Y1 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Gm15467-201ENSMUST00000120582 445 ntBASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Gm6550-201ENSMUST00000187574 993 ntBASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms