Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh9F8VPK8 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh9F8VPK8 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pcdh9F8VPK8 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 Gm5866-201ENSMUST00000177881 973 ntBASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
Pcdh9F8VPK8 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Gm7488-201ENSMUST00000117148 684 ntBASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh9F8VPK8 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Gm13689-201ENSMUST00000119360 685 ntBASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Pcdh9F8VPK8 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms